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NC_048191.1__YP_009823158.1__HOV48_gp002__00002
Bact-VirNC_048191.1__YP_009823158.1__HOV48_gp002__00002
Identity
- Accession:
- NC_048191 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Taxonomy
TaxID: 2849598
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-303
Domain cluster:
rep: IMGVR_UViG_3300042092_000730-3300042092-Ga0453238_010587_859_2079__D220-402
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 124.3 | 8.20e-36 | 100.0% | 40.3% |
D2
medium
residues 26-118
Domain cluster:
rep: ribonucleotide_reductase_large_subunit__YP_232955__Vaccinia_virus__10245__D133-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00317.27 best | Ribonuc_red_lgN | 35.2 | 1.40e-08 | 69.9% | 64.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.57 | 31.0 | 3.01e-01 | 91.4% | 46.2% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 31.0 | 3.52e-01 | 82.8% | 77.3% |
| 4f7aA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 45.0 | 2.89e-01 | 100.0% | 67.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951513 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.90 | 59.0 | 7.00e-01 | 96.8% | 95.4% |
| 3519243 | 1074.1.1.0 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases | 0.86 | 63.0 | 4.72e-01 | 98.9% | 35.0% |
| 3277072 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.86 | 62.0 | 5.07e-01 | 95.7% | 44.5% |
| 2472941 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.84 | 60.0 | 6.69e-01 | 100.0% | 92.0% |
| 4573827 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.83 | 62.0 | 5.72e-01 | 98.9% | 62.6% |
| 4990405 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.83 | 63.0 | 5.89e-01 | 100.0% | 66.4% |
| 3975063 | 1074.1.1.2 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN,RNR_N | 0.82 | 65.0 | 5.13e-01 | 100.0% | 44.7% |
| 3966685 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.81 | 63.0 | 5.73e-01 | 100.0% | 62.5% |
| 3607359 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.81 | 65.0 | 4.80e-01 | 100.0% | 37.6% |
| 2325410 | 1074.1.1.2 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN,RNR_N | 0.81 | 60.0 | 4.88e-01 | 98.9% | 44.7% |
| 3594035 | 1074.1.1.0 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases | 0.80 | 64.0 | 5.61e-01 | 100.0% | 59.2% |
| 3515890 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.79 | 62.0 | 5.49e-01 | 97.8% | 60.0% |
| 2472945 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.78 | 55.0 | 6.02e-01 | 98.9% | 89.5% |
| 2791176 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.78 | 62.0 | 5.52e-01 | 98.9% | 62.1% |
| 5034061 | 148.1.3.400 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ribonuc_red_lgN | 0.76 | 61.0 | 4.67e-01 | 97.8% | 41.1% |
| 4976420 | 1074.1.1.0 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases | 0.75 | 62.0 | 5.96e-01 | 98.9% | 77.1% |
| 4937369 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.74 | 62.0 | 6.37e-01 | 100.0% | 91.1% |
| 4983262 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.73 | 61.0 | 6.10e-01 | 97.8% | 85.3% |
| 3948801 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.72 | 59.0 | 5.27e-01 | 96.8% | 64.0% |
| 5030207 | 1074.1.1.4 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_2_N | 0.67 | 61.0 | 5.59e-01 | 98.9% | 95.8% |
| 4963030 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.66 | 63.0 | 5.66e-01 | 100.0% | 94.2% |
| 4927667 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.65 | 60.0 | 5.49e-01 | 96.8% | 84.3% |
D3
medium
residues 304-406_599-646
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.87 | 77.0 | 7.20e-01 | 92.1% | 99.4% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 76.0 | 7.15e-01 | 92.1% | 100.0% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 75.0 | 7.21e-01 | 92.1% | 100.0% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 76.0 | 7.25e-01 | 92.7% | 97.6% |
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 75.0 | 7.83e-01 | 93.4% | 98.6% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 74.0 | 6.86e-01 | 92.1% | 100.0% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 74.0 | 7.11e-01 | 92.1% | 100.0% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 75.0 | 7.66e-01 | 92.7% | 99.3% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 72.0 | 7.51e-01 | 92.1% | 97.8% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 73.0 | 7.00e-01 | 92.1% | 100.0% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.82 | 72.0 | 7.47e-01 | 90.7% | 100.0% |
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.82 | 72.0 | 6.95e-01 | 92.1% | 100.0% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.81 | 73.0 | 7.55e-01 | 92.7% | 100.0% |
| 1zdeA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 72.0 | 7.04e-01 | 93.4% | 95.0% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.51 | 25.0 | 3.08e-01 | 88.7% | 74.4% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 71.0 | 7.99e-01 | 90.1% | 100.0% |
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 73.0 | 8.08e-01 | 93.4% | 99.2% |
| 5035476 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 80.0 | 7.85e-01 | 92.1% | 98.1% |
| 5066163 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 79.0 | 8.27e-01 | 92.1% | 100.0% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 71.0 | 7.74e-01 | 92.1% | 97.7% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.88 | 78.0 | 5.89e-01 | 92.1% | 100.0% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 78.0 | 6.82e-01 | 92.1% | 100.0% |
| 4060462 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 79.0 | 6.26e-01 | 94.0% | 97.9% |
| 4979989 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 79.0 | 7.39e-01 | 94.0% | 98.9% |
| 3949584 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 77.0 | 7.73e-01 | 90.7% | 99.3% |
| 4946209 | 69.1.1.18 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV | 0.87 | 78.0 | 6.88e-01 | 92.1% | 100.0% |
| 3949431 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 77.0 | 7.82e-01 | 92.1% | 100.0% |
| 2524072 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 77.0 | 7.36e-01 | 92.1% | 98.8% |
| 5031634 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 79.0 | 7.74e-01 | 94.7% | 97.5% |
| 4594307 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 77.0 | 7.38e-01 | 92.7% | 100.0% |
| 4180552 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 7.43e-01 | 92.1% | 100.0% |
| 4335483 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 77.0 | 6.55e-01 | 92.1% | 100.0% |
| 4983458 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 7.40e-01 | 91.4% | 98.8% |
| 4993853 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 7.43e-01 | 92.1% | 100.0% |
| 4979524 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 78.0 | 6.40e-01 | 94.0% | 100.0% |
| 4998392 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 7.46e-01 | 92.7% | 100.0% |
| 4971400 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 78.0 | 6.00e-01 | 93.4% | 53.9% |
| 4975503 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 7.16e-01 | 92.7% | 100.0% |
| 3952464 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 77.0 | 7.85e-01 | 93.4% | 95.9% |
| 5022295 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 78.0 | 7.53e-01 | 94.0% | 100.0% |
| 5012957 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 77.0 | 7.25e-01 | 92.7% | 99.4% |
| 3282306 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 74.0 | 7.82e-01 | 91.4% | 99.3% |
| 3602706 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.86 | 74.0 | 7.75e-01 | 92.1% | 97.8% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 75.0 | 7.48e-01 | 90.7% | 100.0% |
| 5065032 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 76.0 | 7.38e-01 | 92.1% | 100.0% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 7.78e-01 | 92.1% | 100.0% |
| 5024341 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 77.0 | 7.08e-01 | 93.4% | 98.4% |
| 4405940 | 242.1.1.8 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing | 0.85 | 76.0 | 5.13e-01 | 92.1% | 36.0% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 7.46e-01 | 92.7% | 100.0% |
| 4054994 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 77.0 | 7.33e-01 | 93.4% | 97.6% |
| 5012699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 75.0 | 7.18e-01 | 91.4% | 100.0% |
| 5078549 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 76.0 | 7.48e-01 | 93.4% | 98.1% |
| 4930925 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 76.0 | 7.88e-01 | 92.7% | 99.3% |
| 4993128 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 77.0 | 7.55e-01 | 94.0% | 99.4% |
| 4992651 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 7.39e-01 | 93.4% | 97.6% |
| 4039971 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 75.0 | 7.13e-01 | 92.7% | 98.9% |
| 4977673 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 6.43e-01 | 92.1% | 99.6% |
| 4941327 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 71.0 | 7.29e-01 | 86.8% | 98.6% |
| 5029540 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 75.0 | 7.36e-01 | 91.4% | 99.4% |
| 3604383 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 75.0 | 6.52e-01 | 92.1% | 98.6% |
| 4170121 | 69.1.1.11 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing | 0.84 | 75.0 | 7.21e-01 | 92.7% | 99.4% |
| 4999902 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 75.0 | 7.64e-01 | 92.1% | 100.0% |
| 4993437 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 71.0 | 7.33e-01 | 87.4% | 100.0% |
| 4983616 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 75.0 | 7.18e-01 | 92.7% | 100.0% |
| 5066389 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 76.0 | 6.94e-01 | 94.0% | 100.0% |
| 3604439 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 75.0 | 7.20e-01 | 93.4% | 98.8% |
| 182766 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 74.0 | 6.86e-01 | 92.1% | 100.0% |
| 4993454 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 75.0 | 6.32e-01 | 93.4% | 98.7% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 75.0 | 7.68e-01 | 92.7% | 99.3% |
| 4600944 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 77.0 | 7.25e-01 | 95.4% | 99.4% |
| 4487998 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.84 | 77.0 | 7.24e-01 | 95.4% | 99.4% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.84 | 77.0 | 7.64e-01 | 95.4% | 99.4% |
| 5052154 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 75.0 | 7.22e-01 | 92.7% | 100.0% |
| 5031914 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 75.0 | 6.96e-01 | 94.0% | 96.8% |
| 4998394 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 72.0 | 7.13e-01 | 88.7% | 100.0% |
| 3603291 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 75.0 | 7.10e-01 | 94.0% | 97.7% |
| 4930433 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 74.0 | 7.39e-01 | 92.7% | 98.7% |
| 4979631 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 74.0 | 7.46e-01 | 92.1% | 100.0% |
| 4971412 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 72.0 | 6.73e-01 | 90.1% | 100.0% |
| 4975578 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 77.0 | 6.12e-01 | 96.7% | 68.7% |
| 4948016 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 72.0 | 7.25e-01 | 89.4% | 98.0% |
| 5029854 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 74.0 | 6.50e-01 | 93.4% | 97.6% |
| 5029355 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 73.0 | 7.33e-01 | 91.4% | 100.0% |
| 3517362 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.83 | 74.0 | 7.58e-01 | 92.7% | 100.0% |
| 4943244 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 72.0 | 6.93e-01 | 91.4% | 99.4% |
| 4978263 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 73.0 | 7.12e-01 | 92.7% | 97.6% |
| 4993480 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 74.0 | 7.30e-01 | 93.4% | 100.0% |
| 4997604 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 74.0 | 7.05e-01 | 93.4% | 97.6% |
| 4127166 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 72.0 | 7.32e-01 | 91.4% | 99.3% |
| 2445477 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 76.0 | 7.58e-01 | 96.0% | 95.5% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 72.0 | 7.54e-01 | 92.1% | 100.0% |
| 4586920 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 72.0 | 7.17e-01 | 91.4% | 98.7% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 75.0 | 7.69e-01 | 100.0% | 99.3% |
| 4940943 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 73.0 | 7.01e-01 | 93.4% | 98.8% |
| 2323756 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 71.0 | 7.05e-01 | 91.4% | 100.0% |
| 5028299 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 71.0 | 7.10e-01 | 91.4% | 98.7% |
| 4315406 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 72.0 | 6.73e-01 | 92.1% | 100.0% |
| 3511246 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.81 | 70.0 | 6.81e-01 | 90.1% | 88.5% |
| 5013038 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 72.0 | 7.02e-01 | 92.1% | 97.5% |
| 4934481 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 71.0 | 7.21e-01 | 92.1% | 100.0% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.81 | 71.0 | 7.32e-01 | 92.1% | 100.0% |
| 4996401 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 72.0 | 7.06e-01 | 94.0% | 100.0% |
| 4950409 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 71.0 | 7.08e-01 | 93.4% | 97.4% |
| 1291738 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 56.0 | 6.56e-01 | 88.7% | 100.0% |
| 4940699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.78 | 70.0 | 6.94e-01 | 93.4% | 100.0% |
D4
medium
residues 407-476
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hkqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 4.84e-01 | 97.1% | 94.4% |
| 2j0wA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 46.0 | 4.44e-01 | 72.9% | 75.3% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 46.0 | 4.66e-01 | 72.9% | 81.4% |
| 3fzqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.66 | 49.0 | 4.19e-01 | 80.0% | 98.3% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 48.0 | 4.55e-01 | 77.1% | 78.6% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 46.0 | 3.62e-01 | 77.1% | 99.3% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.63 | 49.0 | 4.30e-01 | 84.3% | 83.3% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 4.05e-01 | 72.9% | 78.9% |
| 3tp2B02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 42.0 | 3.81e-01 | 70.0% | 65.3% |
| 4c2mA09 | 3.30.70.2850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 44.0 | 3.37e-01 | 77.1% | 90.2% |
| 1r0aH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 3.67e-01 | 75.7% | 93.5% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.69e-01 | 87.1% | 87.5% |
| 2nraC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.06e-01 | 97.1% | 87.3% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 42.0 | 4.18e-01 | 74.3% | 89.3% |
| 1ej6A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 46.0 | 4.20e-01 | 81.4% | 98.9% |
| 1sjqA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 43.0 | 4.02e-01 | 74.3% | 64.8% |
| 1x4dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 42.0 | 3.75e-01 | 72.9% | 56.9% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 41.0 | 3.82e-01 | 71.4% | 75.3% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 46.0 | 4.18e-01 | 81.4% | 67.4% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.63e-01 | 77.1% | 92.8% |
| 1whxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 41.0 | 3.56e-01 | 72.9% | 51.4% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.58 | 40.0 | 3.83e-01 | 71.4% | 76.5% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 41.0 | 3.17e-01 | 77.1% | 34.5% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 41.0 | 3.12e-01 | 77.1% | 29.5% |
| 2rt3A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 42.0 | 3.79e-01 | 77.1% | 60.8% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 42.0 | 3.49e-01 | 78.6% | 45.4% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.57 | 39.0 | 3.64e-01 | 72.9% | 67.0% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.68e-01 | 77.1% | 81.4% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.57 | 41.0 | 3.89e-01 | 77.1% | 81.4% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 45.0 | 3.81e-01 | 85.7% | 78.6% |
| 7lfbH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.57e-01 | 78.6% | 96.6% |
| 2loeA00 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.38e-01 | 75.7% | 70.1% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.64e-01 | 80.0% | 95.5% |
| 3h2bB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 3.02e-01 | 78.6% | 38.3% |
| 7k0zC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.63e-01 | 80.0% | 98.2% |
| 1r17B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 40.0 | 3.15e-01 | 77.1% | 82.1% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 4.52e-01 | 95.7% | 95.1% |
| 2la4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 47.0 | 4.17e-01 | 94.3% | 73.3% |
| 5whzH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.47e-01 | 80.0% | 98.4% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.55 | 37.0 | 3.54e-01 | 70.0% | 97.6% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 4.11e-01 | 90.0% | 79.3% |
| 3ipjA01 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.55 | 44.0 | 4.29e-01 | 95.7% | 97.5% |
| 3tg9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 38.0 | 2.49e-01 | 72.9% | 95.0% |
| 2uv8A06 | 3.30.70.2490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.94e-01 | 94.3% | 80.6% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.80e-01 | 90.0% | 76.2% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 39.0 | 3.01e-01 | 81.4% | 49.5% |
| 6eg0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.72e-01 | 81.4% | 96.7% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.53 | 40.0 | 3.79e-01 | 82.9% | 88.6% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 2.92e-01 | 78.6% | 33.7% |
| 3slhA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.52 | 40.0 | 2.95e-01 | 87.1% | 92.4% |
| 2crlA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 35.0 | 3.51e-01 | 70.0% | 81.2% |
| 1g6sA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 40.0 | 2.94e-01 | 87.1% | 75.5% |
| 4g7wA00 | 2.40.30.280 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Vibrio phage CTXphi pIII, N-terminal N1 domain | 0.51 | 37.0 | 3.30e-01 | 75.7% | 90.8% |
| 7veeA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.51 | 35.0 | 2.32e-01 | 71.4% | 18.6% |
| 3njfA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 38.0 | 3.26e-01 | 78.6% | 50.0% |
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.83e-01 | 97.1% | 87.5% |
| 3m8uA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.50 | 37.0 | 2.97e-01 | 82.9% | 69.2% |
| 4je0B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.21e-01 | 88.6% | 47.4% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602707 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 64.0 | 5.43e-01 | 95.7% | 100.0% |
| 5023686 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.74 | 62.0 | 5.03e-01 | 91.4% | 70.0% |
| 5028300 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 63.0 | 5.95e-01 | 95.7% | 97.6% |
| 5066390 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 63.0 | 5.36e-01 | 95.7% | 70.4% |
| 3603717 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.73 | 62.0 | 6.01e-01 | 94.3% | 100.0% |
| 4996402 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.73 | 63.0 | 5.65e-01 | 94.3% | 88.4% |
| 4940452 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.73 | 63.0 | 5.41e-01 | 98.6% | 100.0% |
| 4978365 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 59.0 | 5.68e-01 | 90.0% | 100.0% |
| 3602264 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.71 | 60.0 | 5.70e-01 | 94.3% | 92.9% |
| 4992480 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 61.0 | 5.63e-01 | 95.7% | 97.8% |
| 5032337 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 60.0 | 5.74e-01 | 94.3% | 97.5% |
| 4580140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 60.0 | 5.62e-01 | 95.7% | 82.4% |
| 5029541 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 58.0 | 5.39e-01 | 94.3% | 91.1% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 57.0 | 4.81e-01 | 92.9% | 74.2% |
| 4991837 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.68 | 56.0 | 5.05e-01 | 90.0% | 86.3% |
| 4679545 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 57.0 | 4.60e-01 | 92.9% | 65.2% |
| 4590367 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.66 | 56.0 | 4.86e-01 | 95.7% | 65.5% |
| 5081203 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.65 | 56.0 | 4.42e-01 | 95.7% | 49.7% |
| 4666956 | 242.4.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain | 0.65 | 55.0 | 4.84e-01 | 95.7% | 68.6% |
| 4325854 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.65 | 55.0 | 4.76e-01 | 95.7% | 68.2% |
| 3602755 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 52.0 | 5.15e-01 | 91.4% | 96.0% |
| 5055051 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.64 | 52.0 | 4.62e-01 | 91.4% | 61.9% |
| 4354139 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.64 | 55.0 | 4.80e-01 | 95.7% | 68.6% |
| 4174479 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.63 | 49.0 | 4.13e-01 | 82.9% | 70.4% |
| 3231799 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 43.0 | 3.07e-01 | 72.9% | 26.7% |
| 4614542 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.61 | 44.0 | 3.71e-01 | 78.6% | 45.2% |
| 3689828 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 42.0 | 3.84e-01 | 72.9% | 57.9% |
| 3172413 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 43.0 | 3.90e-01 | 74.3% | 69.5% |
| 4930161 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.60 | 51.0 | 4.44e-01 | 95.7% | 63.6% |
| 3593360 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 43.0 | 3.99e-01 | 75.7% | 67.8% |
| 5081595 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.60 | 45.0 | 3.21e-01 | 80.0% | 39.0% |
| 3890951 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 43.0 | 4.01e-01 | 75.7% | 65.9% |
| 4049254 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 42.0 | 3.45e-01 | 75.7% | 54.1% |
| 4948075 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 41.0 | 4.05e-01 | 72.9% | 69.3% |
| 3535753 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 41.0 | 3.95e-01 | 72.9% | 70.0% |
| 3881085 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 41.0 | 4.04e-01 | 72.9% | 74.7% |
| 3631350 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 43.0 | 3.86e-01 | 77.1% | 64.0% |
| 4680822 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.59 | 40.0 | 3.81e-01 | 71.4% | 95.3% |
| 4930904 | 328.5.1.7 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › PF30415 | 0.59 | 41.0 | 4.36e-01 | 72.9% | 85.0% |
| 4011243 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 43.0 | 3.95e-01 | 77.1% | 71.1% |
| 3525258 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 40.0 | 3.67e-01 | 71.4% | 54.7% |
| 4988131 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.58 | 39.0 | 3.83e-01 | 71.4% | 65.0% |
| 3781988 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 40.0 | 3.77e-01 | 74.3% | 66.3% |
| 3169754 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 42.0 | 4.13e-01 | 78.6% | 75.6% |
| 4424225 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.58 | 40.0 | 2.48e-01 | 72.9% | 35.3% |
| 3825654 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 42.0 | 3.64e-01 | 75.7% | 56.2% |
| 3700212 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 42.0 | 2.94e-01 | 80.0% | 34.3% |
| 3647098 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 41.0 | 3.27e-01 | 75.7% | 41.4% |
| 3172411 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 43.0 | 4.01e-01 | 82.9% | 65.6% |
| 4107228 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.56 | 42.0 | 3.64e-01 | 82.9% | 74.8% |
| 4026744 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 40.0 | 2.84e-01 | 77.1% | 29.7% |
| 3176552 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 46.0 | 3.86e-01 | 95.7% | 60.0% |
| 3608814 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 37.0 | 3.05e-01 | 72.9% | 46.4% |
| 3826053 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.53 | 37.0 | 3.45e-01 | 72.9% | 68.9% |
| 5019668 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.52 | 40.0 | 3.69e-01 | 88.6% | 99.0% |
| 3595712 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 43.0 | 4.12e-01 | 95.7% | 80.0% |
| 3413868 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.52 | 40.0 | 3.19e-01 | 84.3% | 69.7% |
| 3178085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.56e-01 | 98.6% | 94.8% |
| 5034987 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.51 | 34.0 | 3.17e-01 | 70.0% | 69.0% |
| 3406922 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.51 | 41.0 | 3.20e-01 | 85.7% | 78.0% |
| 3923830 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.50 | 39.0 | 3.12e-01 | 85.7% | 74.7% |
| 3279474 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.50 | 40.0 | 3.51e-01 | 92.9% | 100.0% |
D5
medium
residues 477-598
Domain cluster:
rep: IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_42162_44546__D269-361
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14528.12 best | LAGLIDADG_3 | 39.9 | 5.60e-10 | 86.9% | 74.4% |
D6
medium
residues 647-793_861-920
Domain cluster:
rep: rr1__YP_009552690__Operophtera_brumata_nucleopolyhedrovirus__1046267__D445-618_684-706
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 56.8 | 2.30e-15 | 57.5% | 21.8% |
| PF02867.21 | Ribonuc_red_lgC | 48.0 | 1.10e-12 | 25.6% | 9.7% |
| PF02867.21 | Ribonuc_red_lgC | 25.8 | 5.90e-06 | 18.8% | 5.7% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.93 | 90.0 | 6.52e-01 | 99.0% | 60.3% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.92 | 89.0 | 5.94e-01 | 98.1% | 43.5% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.92 | 89.0 | 6.03e-01 | 99.0% | 48.6% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.92 | 89.0 | 6.37e-01 | 99.5% | 49.7% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.83 | 80.0 | 5.77e-01 | 100.0% | 42.1% |
| 3ddmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 41.0 | 3.93e-01 | 97.6% | 49.2% |
| 3ro6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 40.0 | 3.86e-01 | 97.6% | 48.8% |
| 3lerA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 45.0 | 3.99e-01 | 98.1% | 47.1% |
| 3lm7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 41.0 | 3.82e-01 | 99.0% | 51.8% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 44.0 | 3.88e-01 | 98.1% | 48.5% |
| 1vhnA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 41.0 | 4.01e-01 | 98.1% | 58.1% |
| 3bxwA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 46.0 | 4.21e-01 | 97.1% | 58.8% |
| 1b30A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 46.0 | 4.05e-01 | 99.0% | 53.8% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 36.0 | 4.28e-01 | 93.7% | 88.4% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 28.0 | 3.56e-01 | 80.7% | 80.7% |
| 1uozA01 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.55 | 41.0 | 3.73e-01 | 99.5% | 56.3% |
| 1mumA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 39.0 | 3.53e-01 | 97.1% | 52.6% |
| 2ovlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 37.0 | 3.59e-01 | 97.6% | 61.7% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.53 | 40.0 | 3.72e-01 | 97.6% | 61.6% |
| 3l5lA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 48.0 | 4.02e-01 | 98.6% | 62.7% |
| 1kblA04 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 49.0 | 4.10e-01 | 99.0% | 71.1% |
| 3rr1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.53 | 39.0 | 3.72e-01 | 97.6% | 65.8% |
| 3axiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 48.0 | 3.76e-01 | 99.0% | 60.5% |
| 7fc0E01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 43.0 | 4.00e-01 | 99.5% | 69.9% |
| 1toaA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 29.0 | 3.59e-01 | 96.1% | 86.3% |
| 7dz9A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 42.0 | 3.88e-01 | 99.0% | 68.2% |
| 2podA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.51 | 39.0 | 3.69e-01 | 97.6% | 64.0% |
| 1r85A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 47.0 | 3.86e-01 | 99.0% | 59.6% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 25.0 | 3.32e-01 | 94.7% | 87.7% |
| 5f2hA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 33.0 | 3.53e-01 | 96.6% | 73.9% |
| 2nqlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.51 | 35.0 | 3.52e-01 | 99.0% | 66.8% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 36.0 | 3.66e-01 | 95.7% | 74.0% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 41.0 | 3.89e-01 | 100.0% | 73.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2472944 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 94.0 | 6.98e-01 | 99.0% | 59.0% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.94 | 91.0 | 6.41e-01 | 98.6% | 50.8% |
| 2504767 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 89.0 | 6.31e-01 | 97.1% | 53.9% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 91.0 | 6.40e-01 | 100.0% | 55.3% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 91.0 | 6.35e-01 | 100.0% | 55.2% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 89.0 | 6.36e-01 | 98.1% | 61.0% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.26e-01 | 100.0% | 57.5% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 90.0 | 6.23e-01 | 100.0% | 53.4% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.44e-01 | 100.0% | 57.6% |
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 90.0 | 6.12e-01 | 100.0% | 59.0% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.33e-01 | 100.0% | 52.1% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.19e-01 | 100.0% | 53.8% |
| 4937370 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 89.0 | 6.07e-01 | 99.0% | 57.4% |
| 4993733 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 89.0 | 6.23e-01 | 99.0% | 50.7% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.36e-01 | 100.0% | 53.5% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 5.95e-01 | 100.0% | 65.3% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 90.0 | 6.34e-01 | 100.0% | 53.0% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 89.0 | 6.13e-01 | 99.0% | 56.5% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 88.0 | 6.27e-01 | 98.1% | 54.1% |
| 4990406 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 89.0 | 6.13e-01 | 100.0% | 59.0% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 89.0 | 6.26e-01 | 100.0% | 58.5% |
| 4985374 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 89.0 | 6.16e-01 | 100.0% | 49.7% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 89.0 | 6.03e-01 | 100.0% | 56.3% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 6.15e-01 | 100.0% | 60.7% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 88.0 | 6.02e-01 | 100.0% | 52.4% |
| 3958480 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.85 | 51.0 | 4.09e-01 | 78.3% | 34.1% |
| 4459803 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.65 | 44.0 | 3.65e-01 | 98.6% | 39.7% |
| 4939652 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.64 | 43.0 | 3.47e-01 | 98.6% | 34.7% |
| 4252460 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.64 | 43.0 | 3.72e-01 | 98.6% | 43.4% |
| 3431392 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 39.0 | 4.33e-01 | 97.1% | 81.2% |
| 3973470 | 2484.6.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD | 0.60 | 25.0 | 3.93e-01 | 95.2% | 96.5% |
| 4990263 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 26.0 | 3.21e-01 | 90.3% | 60.4% |
| None | — | 0.59 | 45.0 | 3.81e-01 | 98.6% | 48.4% | |
| 4141504 | 2002.1.1.41 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase | 0.58 | 44.0 | 3.77e-01 | 98.6% | 49.1% |
| 5048067 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 52.0 | 4.45e-01 | 96.6% | 67.3% |
| 1174275 | 2003.1.1.36 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N | 0.58 | 29.0 | 3.26e-01 | 92.8% | 59.9% |
| 4009339 | 2002.1.1.178 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF4434 | 0.54 | 50.0 | 4.47e-01 | 99.0% | 71.6% |
| 5074897 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 48.0 | 4.10e-01 | 97.1% | 66.8% |
| 4883830 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.53 | 26.0 | 3.60e-01 | 99.0% | 96.8% |
| 3469305 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.53 | 39.0 | 3.01e-01 | 95.2% | 34.6% |
| None | — | 0.52 | 40.0 | 3.53e-01 | 98.6% | 54.2% | |
| 5061634 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.51 | 27.0 | 2.89e-01 | 71.5% | 55.7% |
| 3941023 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.51 | 46.0 | 4.47e-01 | 96.6% | 88.4% |
| 3826138 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.51 | 37.0 | 2.92e-01 | 95.7% | 35.1% |
| 2769950 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 32.0 | 3.49e-01 | 96.6% | 74.3% |
| 4339599 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.51 | 41.0 | 4.00e-01 | 98.1% | 76.2% |
D7
medium
residues 794-860
Domain cluster:
rep: IMGVR_UViG_3300006567_000026-3300006567-Ga0099958_11086953__D213-268