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NC_048191.1__YP_009823277.1__HOV48_gp121__00121
Bact-VirNC_048191.1__YP_009823277.1__HOV48_gp121__00121
Identity
- Accession:
- NC_048191 ↗
- Kingdom:
- phage
Quality
58.8
mean pLDDT
Taxonomy
TaxID: 2849598
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 215-299
Domain cluster:
rep: S2_009_000_R2_scaffold_4_prodigal-single.1__X__X__00360__D24-101
D2
high
residues 334-435
D3
medium
residues 13-55
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.77 | 69.0 | 5.06e-01 | 100.0% | 44.4% |
| 4iw9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 59.0 | 4.45e-01 | 100.0% | 36.3% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.69 | 53.0 | 3.78e-01 | 100.0% | 27.1% |
| 7qovB01 | 1.10.472.20 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit | 0.64 | 44.0 | 3.35e-01 | 76.7% | 29.6% |
| 2iw5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 3.87e-01 | 95.3% | 42.2% |
| 3al2A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.61 | 46.0 | 3.53e-01 | 93.0% | 34.1% |
| 5kfnA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 50.0 | 3.31e-01 | 97.7% | 36.2% |
| 1f3yA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 45.0 | 3.07e-01 | 90.7% | 88.5% |
| 7vkcA01 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.56 | 47.0 | 3.24e-01 | 100.0% | 86.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3478870 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.83 | 61.0 | 4.06e-01 | 83.7% | 21.3% |
| 3684484 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.80 | 70.0 | 4.59e-01 | 100.0% | 32.8% |
| 4032446 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.74 | 61.0 | 5.13e-01 | 95.3% | 57.3% |
| 3311592 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.70 | 58.0 | 3.66e-01 | 100.0% | 18.3% |
| 2791177 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.70 | 51.0 | 3.88e-01 | 100.0% | 33.0% |
| 3451236 | 397.4.1.3 ↗ | few secondary structure elements › Toxic hairpin › VhTI-like › VhTI-like › PF31266 | 0.66 | 48.0 | 4.80e-01 | 86.0% | 80.0% |
| 3584823 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 54.0 | 3.98e-01 | 97.7% | 40.8% |