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NC_048192.1__YP_009823306.1__HOV49_gp10__00010

Bact-Vir

Identity

Accession:: NC_048192 ↗
Kingdom:: phage

Quality

83.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fibralongavirus› Staphylococcus_phage_vB_SpsS_QT1

TaxID: 2510452

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-53_66-189

PDB

Domain cluster: rep: KR816341.1__AKQ06892.1__X__00033__D8-203

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x1wL02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.60	31.0	3.83e-01	71.9%	78.1%
5yjlD01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.60	41.0	4.47e-01	97.0%	82.4%
5h5zA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	28.0	3.77e-01	71.9%	86.4%
2hq9B00	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.57	42.0	4.56e-01	92.2%	91.2%
1c16A02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	27.0	3.37e-01	71.9%	76.3%
2nykA02	2.60.40.2530	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.53	26.0	3.38e-01	72.5%	85.1%
2cz4A00	3.30.70.120	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	27.0	3.30e-01	75.4%	78.8%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4032554	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.93	84.0	8.47e-01	98.2%	93.9%
4030848	1.1.13.52 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1	0.84	80.0	8.09e-01	98.2%	100.0%
3589778	1.1.5.78 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1	0.84	80.0	8.00e-01	100.0%	98.8%
4140243	1.1.5.82 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001	0.81	54.0	6.43e-01	89.8%	97.4%
3590380	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.79	75.0	7.28e-01	99.4%	98.3%
5004308	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.75	65.0	6.78e-01	92.8%	98.1%
2471641	1.1.5.24 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19	0.71	56.0	5.97e-01	91.0%	91.3%
3976188	1.1.13.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube	0.71	58.0	5.85e-01	97.0%	84.8%
2101633	1.1.13.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube	0.69	55.0	5.57e-01	98.8%	82.6%
2101663	1.1.5.24 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19	0.66	55.0	5.62e-01	88.6%	90.2%
3059162	1.1.13.30 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41	0.65	47.0	5.35e-01	84.4%	98.4%
3265120	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.60	55.0	5.40e-01	98.2%	93.1%
3264744	1.1.5.23 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP	0.59	54.0	5.30e-01	98.2%	93.1%
4998991	1.1.5.31 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2	0.57	43.0	4.67e-01	92.2%	94.3%
5071939	1.1.5.31 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2	0.51	42.0	4.33e-01	92.8%	92.5%

D2 high residues 212-292

PDB

Domain cluster: rep: NC_028805.1__YP_009199102.1__AVV11_gp150__00041__D695-776

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02368.25 best	Big_2	40.9	2.20e-10	98.8%	87.3%