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NC_048195.1__YP_009823606.1__HOV52_gp053__00053
Bact-VirNC_048195.1__YP_009823606.1__HOV52_gp053__00053
Identity
- Accession:
- NC_048195 ↗
- Kingdom:
- phage
Quality
66.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Lindbergviridae›
Wifcevirus›
Escherichia_phage_vB_EcoM_WFC
TaxID: 2508193
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-51
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.82 | 69.0 | 4.71e-01 | 100.0% | 27.1% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 67.0 | 6.20e-01 | 100.0% | 73.5% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.79 | 56.0 | 3.92e-01 | 76.5% | 25.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 67.0 | 5.98e-01 | 100.0% | 78.1% |
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.76 | 49.0 | 4.78e-01 | 80.4% | 60.0% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 67.0 | 5.09e-01 | 100.0% | 43.9% |
| 2py6A01 | 1.20.1270.160 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.73 | 51.0 | 4.54e-01 | 74.5% | 65.8% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.71 | 53.0 | 5.45e-01 | 82.4% | 85.4% |
| 2fm8C01 | 1.10.4150.10 | Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like | 0.69 | 56.0 | 3.75e-01 | 90.2% | 82.8% |
| 1dd9A03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.67 | 46.0 | 4.50e-01 | 74.5% | 64.4% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 48.0 | 3.22e-01 | 90.2% | 21.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3554395 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.87 | 77.0 | 4.66e-01 | 100.0% | 16.7% |
| 5030302 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.84 | 76.0 | 6.12e-01 | 100.0% | 53.7% |
| 3862031 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.81 | 68.0 | 4.33e-01 | 100.0% | 19.6% |
| 4848262 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.79 | 69.0 | 5.46e-01 | 100.0% | 47.7% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.73 | 61.0 | 4.34e-01 | 100.0% | 74.1% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 62.0 | 4.83e-01 | 96.1% | 45.5% |
| 3281127 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.72 | 61.0 | 5.20e-01 | 100.0% | 60.0% |
| 3940953 | 109.4.1.623 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1 | 0.72 | 64.0 | 3.51e-01 | 100.0% | 6.9% |
| 3590755 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 57.0 | 5.47e-01 | 92.2% | 80.0% |
| 2814930 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.70 | 60.0 | 5.11e-01 | 96.1% | 66.3% |
| 4446039 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.69 | 57.0 | 5.14e-01 | 92.2% | 65.7% |
| 3952404 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.69 | 48.0 | 3.47e-01 | 74.5% | 25.3% |
| 3355429 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.69 | 56.0 | 5.23e-01 | 94.1% | 72.3% |
| 3264401 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.68 | 56.0 | 5.09e-01 | 100.0% | 68.0% |
| 3225484 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.62 | 48.0 | 4.42e-01 | 88.2% | 62.9% |
| 3838608 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 50.0 | 4.79e-01 | 100.0% | 78.5% |