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NC_048208.1__YP_009824941.1__HOV01_gp70__00070

Bact-Vir

NC_048208.1__YP_009824941.1__HOV01_gp70__00070

Identity

Accession:
NC_048208 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Christensenvirus› Escherichia_phage_vB_EcoS_IME542

TaxID: 2507711

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-102
PDB
Domain cluster: rep: ON602723.1__UVX28986.1__A1p_00054__00054__D3-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 36.1 5.30e-09 49.5% 95.7%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.77 71.0 6.87e-01 100.0% 88.7%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.64 58.0 4.83e-01 100.0% 72.8%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 25.0 3.02e-01 87.4% 69.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965202 378.1.1.19 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.84 77.0 7.32e-01 98.9% 96.4%
3586841 378.1.1.7 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.77 71.0 6.67e-01 100.0% 93.9%
3539740 378.1.1.19 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.72 61.0 5.55e-01 90.5% 70.4%
89916 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.64 58.0 4.86e-01 100.0% 72.8%
8233 378.1.1.6 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.64 58.0 4.83e-01 100.0% 72.8%
3695527 378.1.1.6 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.62 57.0 5.25e-01 100.0% 89.2%
4993343 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.56 29.0 3.70e-01 82.1% 100.0%
4944882 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.56 31.0 3.90e-01 85.3% 100.0%
4947865 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.56 31.0 3.80e-01 83.2% 98.0%
5024735 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.56 30.0 3.77e-01 85.3% 96.0%
4006493 4032.1.1.3 ↗ beta complex topology › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › FLIC_barrel 0.56 33.0 3.92e-01 70.5% 91.7%
4992635 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 30.0 3.67e-01 84.2% 100.0%
5069260 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 30.0 3.77e-01 87.4% 100.0%
4941478 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.54 32.0 3.81e-01 88.4% 100.0%
5045347 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 41.0 3.12e-01 84.2% 70.0%
D2 high residues 106-158
PDB
Domain cluster: rep: ON453898.1__WAK79281.1__X__00081__D137-191
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bn8A00 3.30.730.20 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › Cell division activator CedA 0.77 64.0 5.98e-01 94.3% 73.1%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.76 58.0 5.32e-01 83.0% 67.1%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.74 56.0 5.14e-01 83.0% 70.4%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.73 56.0 4.95e-01 83.0% 77.6%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.70 55.0 4.97e-01 90.6% 98.7%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.69 51.0 4.01e-01 83.0% 43.8%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.69 51.0 3.85e-01 83.0% 45.3%
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.67 56.0 3.53e-01 100.0% 83.4%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 49.0 4.14e-01 83.0% 53.2%
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 45.0 3.01e-01 75.5% 28.2%
2dt8A02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.64 48.0 3.68e-01 83.0% 48.5%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 47.0 3.83e-01 83.0% 47.0%
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.64 44.0 2.95e-01 71.7% 41.1%
4axhA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.63 40.0 3.02e-01 71.7% 25.8%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 52.0 4.06e-01 98.1% 90.8%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 48.0 4.10e-01 86.8% 69.2%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.62 46.0 3.23e-01 79.2% 55.6%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.61 46.0 3.41e-01 83.0% 82.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 51.0 4.28e-01 98.1% 77.3%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 3.28e-01 73.6% 38.0%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 40.0 3.00e-01 71.7% 28.1%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.60 46.0 4.19e-01 90.6% 87.5%
2f51A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 47.0 3.78e-01 90.6% 99.1%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.59 44.0 3.50e-01 83.0% 43.4%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.59 42.0 2.87e-01 75.5% 43.5%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 3.42e-01 98.1% 73.2%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.59 39.0 3.23e-01 71.7% 61.1%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 41.0 3.40e-01 71.7% 50.0%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 41.0 3.53e-01 79.2% 68.4%
2g7zA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.58 42.0 3.37e-01 81.1% 48.3%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.58 41.0 3.31e-01 79.2% 51.7%
1je0C00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 49.0 3.31e-01 100.0% 93.0%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 46.0 3.68e-01 96.2% 89.3%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 41.0 3.34e-01 81.1% 42.7%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 47.0 3.66e-01 98.1% 69.8%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.57 37.0 3.70e-01 84.9% 65.5%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 43.0 3.34e-01 84.9% 72.2%
4d47A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 45.0 2.77e-01 100.0% 33.3%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.56 44.0 3.64e-01 90.6% 74.5%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 43.0 2.80e-01 90.6% 52.7%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.67e-01 81.1% 85.3%
4bq6F00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 37.0 2.80e-01 71.7% 34.9%
1q5qH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 47.0 3.18e-01 100.0% 38.4%
3ejjX02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.12e-01 73.6% 56.6%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.11e-01 83.0% 46.6%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.53 38.0 3.13e-01 79.2% 42.5%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 45.0 3.04e-01 100.0% 94.8%
4qt4A00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.52 39.0 2.75e-01 84.9% 75.1%
1rypL00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 44.0 3.00e-01 100.0% 47.2%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.52 36.0 3.60e-01 84.9% 71.4%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 37.0 2.36e-01 81.1% 31.1%
5mgyA00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.52 41.0 2.70e-01 98.1% 90.2%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.51 40.0 3.50e-01 92.5% 93.3%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.33e-01 92.5% 80.6%
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.60e-01 100.0% 50.3%
3oulA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 39.0 2.63e-01 94.3% 20.7%
2mjlA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.50 40.0 2.90e-01 100.0% 88.3%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965886 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.89 70.0 7.51e-01 84.9% 100.0%
3827127 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.89 70.0 5.70e-01 86.8% 47.4%
3334492 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.86 69.0 5.97e-01 90.6% 57.5%
3468885 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.84 76.0 6.57e-01 100.0% 67.5%
3164102 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.78 57.0 6.11e-01 100.0% 93.3%
4030681 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.78 62.0 5.85e-01 88.7% 81.5%
4024768 330.3.1.7 ↗ a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › AP2 0.77 58.0 5.75e-01 83.0% 92.7%
3253472 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 57.0 4.90e-01 83.0% 55.3%
4027687 330.3.1.0 ↗ a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.74 59.0 5.92e-01 90.6% 98.2%
4028791 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.74 57.0 5.68e-01 86.8% 98.2%
3299580 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.72 56.0 5.28e-01 84.9% 69.2%
4023919 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.72 56.0 5.29e-01 86.8% 83.1%
3494433 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.72 55.0 4.19e-01 83.0% 37.1%
4028013 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.71 58.0 5.27e-01 94.3% 76.0%
4029439 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.71 55.0 5.19e-01 90.6% 82.6%
4025434 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.71 54.0 4.91e-01 86.8% 70.7%
3299579 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.70 52.0 4.79e-01 83.0% 70.0%
1937542 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.70 52.0 4.03e-01 83.0% 45.2%
3797651 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 52.0 4.42e-01 83.0% 53.3%
4029445 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.69 55.0 5.45e-01 90.6% 98.2%
3510389 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 52.0 4.46e-01 84.9% 51.7%
3942150 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.67 55.0 4.71e-01 94.3% 90.0%
4026577 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.67 50.0 5.03e-01 83.0% 92.7%
4944239 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.67 50.0 3.82e-01 83.0% 47.7%
4136892 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.66 45.0 4.01e-01 73.6% 60.0%
4027686 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.65 49.0 4.91e-01 86.8% 100.0%
3286982 330.6.1.0 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.64 51.0 4.24e-01 92.5% 68.3%
4027723 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.64 51.0 4.75e-01 94.3% 91.4%
3580295 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.64 45.0 3.20e-01 77.4% 76.0%
3281041 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.64 47.0 3.66e-01 83.0% 47.7%
4134161 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.63 46.0 3.59e-01 83.0% 46.7%
4946414 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.63 47.0 3.72e-01 83.0% 51.2%
4004358 252.2.1.3 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 0.63 48.0 4.90e-01 84.9% 100.0%
4942828 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.62 43.0 3.10e-01 73.6% 75.6%
4376573 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.62 45.0 3.58e-01 83.0% 51.6%
3627778 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.61 45.0 3.69e-01 81.1% 42.0%
943 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.61 42.0 3.47e-01 73.6% 46.0%
3221700 2484.6.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.61 44.0 3.27e-01 83.0% 26.9%
3166231 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.61 50.0 3.57e-01 100.0% 94.7%
3388095 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.60 49.0 3.52e-01 100.0% 93.1%
5044376 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.60 45.0 2.82e-01 83.0% 15.7%
3213262 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.59 43.0 3.61e-01 81.1% 47.0%
3260099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 44.0 3.78e-01 83.0% 84.4%
4533094 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 43.0 3.34e-01 81.1% 33.8%
3838342 3799.1.1.1 ↗ alpha bundles › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA_adhesion 0.58 50.0 2.93e-01 100.0% 25.6%
3213706 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 43.0 2.87e-01 81.1% 19.5%
3501894 2.1.1.39 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 0.58 43.0 3.40e-01 84.9% 72.8%
3796100 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 43.0 3.21e-01 83.0% 30.0%
3308710 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 40.0 3.78e-01 83.0% 60.0%
4681706 1046.1.1.1 ↗ alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.56 41.0 2.89e-01 77.4% 62.8%
3927652 2484.5.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.56 41.0 3.34e-01 81.1% 41.8%
5035011 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.56 38.0 2.60e-01 75.5% 19.1%
5058881 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 41.0 2.60e-01 83.0% 40.3%
4975800 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.56 42.0 3.29e-01 90.6% 79.3%
3720000 330.16.1.0 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.55 42.0 3.87e-01 83.0% 71.4%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 39.0 2.37e-01 81.1% 68.3%
5028546 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 35.0 3.32e-01 84.9% 51.4%
4090709 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.54 40.0 3.33e-01 86.8% 81.7%
3558557 330.16.1.0 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.54 37.0 3.43e-01 75.5% 69.3%
5059777 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 38.0 2.82e-01 81.1% 89.4%
3989004 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 43.0 2.77e-01 100.0% 50.3%
3248970 101.1.12.0 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.52 42.0 3.42e-01 94.3% 75.5%
5007182 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.52 39.0 2.93e-01 84.9% 32.3%
3996686 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.52 38.0 2.82e-01 81.1% 35.3%
3925367 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 2.81e-01 81.1% 28.0%
3170723 220.1.1.95 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.51 41.0 3.33e-01 94.3% 73.9%
3879653 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.51 35.0 3.30e-01 73.6% 80.0%
4932907 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.50 37.0 2.54e-01 90.6% 50.7%