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NC_048631.1__YP_009829899.1__HWA84_gp25__00025

Bact-Vir

NC_048631.1__YP_009829899.1__HWA84_gp25__00025

Identity

Accession:
NC_048631 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spizizenvirus› Bacillus_phage_phi105

TaxID: 10717

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-188
PDB
Domain cluster: rep: MZ501270.1__QZA71203.1__AH07_16__00016__D27-58_74-163
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.67 35.0 4.21e-01 76.0% 74.5%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.63 39.0 4.41e-01 92.5% 82.4%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 34.0 4.09e-01 76.0% 85.1%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 33.0 4.19e-01 77.4% 91.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 23.0 3.31e-01 74.7% 77.3%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 33.0 3.69e-01 78.8% 72.9%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 51.0 4.16e-01 100.0% 90.0%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 33.0 3.74e-01 78.1% 75.9%
2m1cA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 36.0 4.03e-01 77.4% 85.8%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 34.0 3.74e-01 79.5% 75.6%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 32.0 3.72e-01 76.0% 80.8%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.54 35.0 3.68e-01 100.0% 71.9%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 34.0 3.77e-01 77.4% 78.2%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 40.0 3.56e-01 76.0% 74.9%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.71e-01 100.0% 86.8%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 25.0 3.42e-01 100.0% 93.7%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 32.0 3.58e-01 77.4% 74.8%
5wnoA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 30.0 3.76e-01 75.3% 92.1%
2ea9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 33.0 4.00e-01 72.6% 98.9%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 25.0 3.55e-01 100.0% 100.0%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 38.0 3.18e-01 76.0% 92.1%
4bwkB01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 39.0 3.25e-01 82.2% 55.5%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960622 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.67 33.0 4.07e-01 78.1% 73.7%
3602995 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.62 35.0 3.88e-01 78.1% 69.6%
3387865 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 33.0 3.93e-01 71.2% 76.8%
5016233 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 35.0 4.09e-01 79.5% 77.8%
4000746 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.59 35.0 4.33e-01 76.0% 95.5%
3782262 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.59 43.0 4.83e-01 85.6% 96.5%
3924796 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.58 34.0 3.82e-01 77.4% 73.0%
5053495 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 36.0 3.55e-01 79.5% 56.9%
4279762 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 31.0 3.99e-01 72.6% 90.6%
3620218 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 32.0 4.05e-01 76.0% 89.9%
3479048 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 34.0 4.27e-01 77.4% 96.7%
4950433 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 34.0 3.82e-01 77.4% 77.0%
4991121 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 35.0 3.92e-01 78.1% 79.1%
5006876 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 34.0 3.85e-01 76.7% 78.8%
2779090 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 34.0 4.10e-01 76.7% 92.7%
4945229 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 35.0 3.80e-01 78.1% 75.8%
3701440 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 33.0 4.15e-01 76.0% 97.8%
4001208 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.55 35.0 3.20e-01 80.1% 49.2%
5049691 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 33.0 3.86e-01 76.7% 85.0%
4042767 223.1.1.103 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 0.55 33.0 3.48e-01 72.6% 65.2%
3704789 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 33.0 3.97e-01 76.7% 89.8%
3937820 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 32.0 4.05e-01 77.4% 98.8%
3698579 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 35.0 3.97e-01 76.7% 85.5%
4461163 223.1.1.45 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GdpP_PAS 0.54 33.0 3.24e-01 79.5% 54.4%
5041753 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 33.0 3.72e-01 78.1% 79.1%
3592234 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 34.0 3.87e-01 76.7% 85.5%
4978592 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 32.0 3.58e-01 76.0% 76.5%
3087264 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 33.0 3.86e-01 77.4% 88.6%
4929825 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 34.0 3.72e-01 76.7% 79.0%
4440297 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 34.0 3.46e-01 77.4% 66.4%
3977017 223.1.1.57 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif 0.52 38.0 3.28e-01 75.3% 81.8%
5046709 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 37.0 3.93e-01 76.0% 83.1%
4927372 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 3.87e-01 78.8% 86.1%
2885396 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.51 31.0 3.45e-01 93.2% 74.4%
5070420 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 39.0 4.03e-01 84.2% 100.0%