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NC_048637.1__YP_009830379.1__HWA92_gp075__00075

Bact-Vir

NC_048637.1__YP_009830379.1__HWA92_gp075__00075

Identity

Accession:
NC_048637 ↗
Kingdom:
phage

Quality

75.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 37.4 3.50e-09 82.5% 84.3%
PF13411.13 MerR_1 35.2 1.50e-08 82.5% 65.2%
PF00376.30 MerR 44.5 1.50e-11 64.9% 100.0%
D2 high residues 244-318
PDB
D3 medium residues 73-121_136-148
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.58 43.0 4.12e-01 80.6% 97.2%
2pw4A00 1.10.3300.10 Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain 0.51 41.0 3.01e-01 91.9% 70.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3710645 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 2.58e-01 100.0% 30.7%
D4 medium residues 193-237
PDB