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NC_048639.1__YP_009830639.1__HWA94_gp49__00068
Bact-VirNC_048639.1__YP_009830639.1__HWA94_gp49__00068
Identity
- Accession:
- NC_048639 ↗
- Kingdom:
- phage
Quality
73.3
mean pLDDT
Taxonomy
TaxID: 1622116
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-56
Domain cluster:
rep: OR521085.1__WNO28353.1__SEA_PSONYX_43__00043__D7-58
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 2.86e-01 | 76.8% | 73.5% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 37.0 | 3.12e-01 | 85.7% | 74.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019878 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.65 | 49.0 | 3.88e-01 | 83.9% | 100.0% |
| 3612039 | 2492.1.1.13 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › PROCT | 0.60 | 47.0 | 2.99e-01 | 83.9% | 72.4% |
| 3201294 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.60 | 41.0 | 3.19e-01 | 71.4% | 32.0% |
| 3269829 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.57 | 32.0 | 3.53e-01 | 71.4% | 66.7% |
| 3578306 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 38.0 | 3.46e-01 | 71.4% | 54.7% |
| 4654307 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.53 | 36.0 | 3.39e-01 | 71.4% | 64.3% |
| 3167342 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.53 | 42.0 | 2.60e-01 | 89.3% | 17.2% |
| 3302251 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.52 | 40.0 | 3.67e-01 | 91.1% | 78.8% |
| 3445882 | 247.1.1.8 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 | 0.51 | 40.0 | 2.51e-01 | 89.3% | 49.1% |
| 3805865 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 42.0 | 3.35e-01 | 94.6% | 75.6% |
| 3214509 | 2006.1.6.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb | 0.51 | 38.0 | 2.42e-01 | 78.6% | 16.6% |
| 3578390 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 41.0 | 2.91e-01 | 92.9% | 60.5% |
| None | — | 0.50 | 40.0 | 2.51e-01 | 92.9% | 53.4% | |
| None | — | 0.50 | 40.0 | 2.50e-01 | 92.9% | 57.7% |