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NC_048639.1__YP_009830649.1__HWA94_gp39__00078

Bact-Vir

NC_048639.1__YP_009830649.1__HWA94_gp39__00078

Identity

Accession:
NC_048639 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-145
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 36.0 4.01e-01 89.5% 50.5%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.83 37.0 5.52e-01 88.7% 94.8%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.72 36.0 4.09e-01 88.7% 63.2%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.71 34.0 4.86e-01 89.5% 96.7%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.62 35.0 4.25e-01 90.3% 85.2%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 4.49e-01 92.7% 82.7%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.59 36.0 3.33e-01 93.5% 47.7%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.55 28.0 3.00e-01 89.5% 54.5%
1gzmA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 46.0 3.45e-01 99.2% 60.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704321 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.78 37.0 4.48e-01 91.1% 67.1%
3737161 3559.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 0.74 35.0 3.74e-01 88.7% 50.9%
4660205 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.70 35.0 3.46e-01 88.7% 45.2%
3255232 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.70 35.0 2.74e-01 88.7% 24.4%
3619724 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.65 38.0 4.22e-01 93.5% 72.0%
4024098 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 34.0 3.98e-01 92.7% 78.9%
3989138 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 43.0 3.60e-01 83.1% 73.3%
3499416 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 39.0 2.60e-01 76.6% 76.5%