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NC_048651.1__YP_009831925.1__HWD36_gp12__00012
Bact-VirNC_048651.1__YP_009831925.1__HWD36_gp12__00012
Identity
- Accession:
- NC_048651 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
TaxID: 1913112
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-68
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09466.17 best | Yqai | 41.7 | 1.40e-10 | 98.0% | 62.3% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dsmA00 | 3.30.40.30 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › YqaI domain | 0.77 | 60.0 | 5.27e-01 | 84.0% | 59.7% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 52.0 | 4.50e-01 | 90.0% | 49.4% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 51.0 | 5.12e-01 | 78.0% | 100.0% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.71 | 53.0 | 4.37e-01 | 84.0% | 72.2% |
| 3o70A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 52.0 | 5.07e-01 | 82.0% | 92.7% |
| 2k16A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 48.0 | 4.27e-01 | 82.0% | 80.0% |
| 2m85A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 45.0 | 4.21e-01 | 76.0% | 78.5% |
| 1wemA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 48.0 | 4.26e-01 | 84.0% | 78.9% |
| 4f03A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 50.0 | 3.90e-01 | 86.0% | 49.5% |
| 5z8nA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 43.0 | 4.41e-01 | 74.0% | 100.0% |
| 4qf3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 43.0 | 4.16e-01 | 76.0% | 86.0% |
| 2co8A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.60 | 44.0 | 3.81e-01 | 80.0% | 58.5% |
| 5xfoA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 41.0 | 4.04e-01 | 74.0% | 87.5% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 47.0 | 4.00e-01 | 90.0% | 83.7% |
| 1x3cA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 43.0 | 3.85e-01 | 80.0% | 58.9% |
| 5tdrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 43.0 | 3.94e-01 | 82.0% | 75.7% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 3.07e-01 | 82.0% | 35.1% |
| 2kaeA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.56 | 43.0 | 4.22e-01 | 92.0% | 80.4% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.54 | 40.0 | 4.14e-01 | 90.0% | 95.3% |
| 1wysA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.53 | 37.0 | 3.33e-01 | 76.0% | 52.0% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 36.0 | 3.21e-01 | 76.0% | 93.6% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 30.0 | 3.12e-01 | 70.0% | 59.1% |
| 1fjmB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 37.0 | 2.44e-01 | 88.0% | 66.4% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8218 | 377.8.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YqaI-like › YqaI-like › Yqai | 0.77 | 60.0 | 5.50e-01 | 84.0% | 67.2% |
| 3778912 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.77 | 51.0 | 5.69e-01 | 74.0% | 100.0% |
| 3211857 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.76 | 53.0 | 5.50e-01 | 76.0% | 82.2% |
| 3399999 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.75 | 51.0 | 5.48e-01 | 76.0% | 90.0% |
| 3436977 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.72 | 54.0 | 4.56e-01 | 82.0% | 50.6% |
| 3268019 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.72 | 56.0 | 5.17e-01 | 86.0% | 89.2% |
| 3734963 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.72 | 48.0 | 5.43e-01 | 88.0% | 100.0% |
| 3596528 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 52.0 | 4.89e-01 | 86.0% | 63.5% |
| 3465532 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 52.0 | 4.70e-01 | 80.0% | 60.0% |
| 3734051 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 54.0 | 5.65e-01 | 84.0% | 97.8% |
| 3207695 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 47.0 | 4.76e-01 | 70.0% | 76.0% |
| 4161387 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.71 | 53.0 | 5.09e-01 | 84.0% | 73.3% |
| 4970980 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 53.0 | 5.03e-01 | 86.0% | 96.8% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 52.0 | 4.98e-01 | 82.0% | 86.7% |
| 5071881 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.70 | 52.0 | 4.97e-01 | 84.0% | 68.3% |
| 4997635 | 376.1.1.182 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_ribbon_3 | 0.70 | 54.0 | 4.76e-01 | 90.0% | 78.8% |
| 3333897 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.69 | 52.0 | 4.46e-01 | 82.0% | 66.3% |
| 4027994 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.69 | 53.0 | 4.96e-01 | 88.0% | 80.0% |
| 3688034 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.69 | 50.0 | 4.09e-01 | 80.0% | 46.0% |
| 3801661 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 50.0 | 5.36e-01 | 88.0% | 100.0% |
| 5076504 | 376.1.1.183 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_1 | 0.69 | 49.0 | 4.94e-01 | 78.0% | 82.0% |
| 3601630 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 51.0 | 3.23e-01 | 86.0% | 17.3% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.68 | 54.0 | 5.08e-01 | 86.0% | 86.7% |
| 3503755 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 51.0 | 4.89e-01 | 82.0% | 93.2% |
| 3372479 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.68 | 49.0 | 4.79e-01 | 78.0% | 90.9% |
| 2647807 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.68 | 51.0 | 5.09e-01 | 82.0% | 98.0% |
| 3876455 | 376.1.1.78 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 | 0.68 | 51.0 | 5.03e-01 | 86.0% | 96.4% |
| 3735240 | 376.1.1.114 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING-like | 0.67 | 49.0 | 4.68e-01 | 80.0% | 100.0% |
| 3912396 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.67 | 47.0 | 4.64e-01 | 76.0% | 85.5% |
| 3925226 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 44.0 | 3.02e-01 | 90.0% | 18.4% |
| 5074188 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 50.0 | 4.64e-01 | 86.0% | 76.8% |
| 5065866 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 48.0 | 4.82e-01 | 78.0% | 90.0% |
| 3390300 | 375.1.1.187 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zf_2nd_IFT121 | 0.66 | 50.0 | 4.41e-01 | 90.0% | 63.5% |
| 3712416 | 375.1.1.187 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zf_2nd_IFT121 | 0.66 | 50.0 | 4.60e-01 | 86.0% | 82.9% |
| 3508827 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 45.0 | 4.99e-01 | 70.0% | 100.0% |
| 3825851 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 50.0 | 4.55e-01 | 84.0% | 98.6% |
| 3417508 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.66 | 47.0 | 4.71e-01 | 84.0% | 76.0% |
| 3936596 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 45.0 | 3.71e-01 | 70.0% | 67.8% |
| 3521135 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.66 | 50.0 | 4.52e-01 | 84.0% | 81.4% |
| 3719758 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 48.0 | 4.52e-01 | 82.0% | 84.6% |
| 3628258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 48.0 | 3.44e-01 | 82.0% | 28.0% |
| 3728775 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 50.0 | 4.34e-01 | 88.0% | 81.2% |
| 3452589 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.65 | 47.0 | 4.59e-01 | 78.0% | 94.5% |
| 3924159 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 49.0 | 4.12e-01 | 84.0% | 66.7% |
| 3601028 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 47.0 | 4.51e-01 | 80.0% | 75.0% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 49.0 | 4.43e-01 | 84.0% | 78.6% |
| 3168434 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.65 | 47.0 | 4.28e-01 | 80.0% | 72.9% |
| 3379180 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 48.0 | 4.57e-01 | 82.0% | 91.5% |
| 3495529 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 46.0 | 4.57e-01 | 80.0% | 83.6% |
| 3784490 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.64 | 48.0 | 4.40e-01 | 84.0% | 75.7% |
| 3498867 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 48.0 | 3.97e-01 | 86.0% | 80.0% |
| 3520763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 49.0 | 4.30e-01 | 84.0% | 61.3% |
| 3363358 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.63 | 44.0 | 4.44e-01 | 74.0% | 100.0% |
| 3380774 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.63 | 51.0 | 4.77e-01 | 90.0% | 74.6% |
| 3706927 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.63 | 45.0 | 4.36e-01 | 80.0% | 93.3% |
| 4013492 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.63 | 45.0 | 4.51e-01 | 76.0% | 100.0% |
| 3376798 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 46.0 | 4.44e-01 | 82.0% | 86.7% |
| 3221969 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 44.0 | 4.00e-01 | 78.0% | 82.7% |
| 3938423 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 46.0 | 4.72e-01 | 86.0% | 83.7% |
| 3211179 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 50.0 | 4.28e-01 | 92.0% | 82.4% |
| 4943351 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 47.0 | 4.65e-01 | 86.0% | 80.0% |
| 3669337 | 376.1.2.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_11 | 0.61 | 51.0 | 4.62e-01 | 96.0% | 72.9% |
| 3994024 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 47.0 | 4.31e-01 | 88.0% | 65.7% |
| 4990542 | 377.1.1.128 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2175 | 0.60 | 47.0 | 4.87e-01 | 94.0% | 97.8% |
| 3474931 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 47.0 | 3.46e-01 | 90.0% | 43.9% |
| 3806561 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 46.0 | 4.18e-01 | 86.0% | 90.0% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 42.0 | 3.94e-01 | 80.0% | 93.8% |
| 3749885 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 42.0 | 4.29e-01 | 84.0% | 94.0% |
| 3218396 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.54 | 39.0 | 3.75e-01 | 82.0% | 76.7% |
| 3609592 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.53 | 42.0 | 3.74e-01 | 94.0% | 63.7% |
| 3576653 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.52 | 37.0 | 2.93e-01 | 76.0% | 41.7% |
| 4398485 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.51 | 34.0 | 2.24e-01 | 70.0% | 57.3% |