Back to structures

NC_048665.1__YP_009833546.1__HWB20_gp27__00027

Bact-Vir

NC_048665.1__YP_009833546.1__HWB20_gp27__00027

Identity

Accession:
NC_048665 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-43_66-96
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 44.0 3.41e-01 100.0% 91.2%
2z0bE00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 46.0 4.07e-01 100.0% 69.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4454600 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.55 43.0 4.42e-01 100.0% 91.4%
379 2.1.1.108 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SBB_T7 0.52 44.0 3.41e-01 100.0% 91.2%
D2 medium residues 44-65_98-149
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.58 43.0 4.34e-01 97.3% 78.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4387174 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 45.0 4.27e-01 74.3% 74.4%
5027622 4040.1.1.1 alpha bundles › Fic-like › Fic-like › Fic-like › Fic 0.53 44.0 3.19e-01 98.6% 70.6%