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NC_048671.1__YP_009834203.1__HWB26_gp16__00016

Bact-Vir

NC_048671.1__YP_009834203.1__HWB26_gp16__00016

Identity

Accession:
NC_048671 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Veravirus› Lentibacter_phage_vB_LenP_ICBM2

TaxID: 2847823

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-68
PDB
Domain cluster: rep: ON146294.1__URG13002.1__B2_9__00009__D7-62
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 4.87e-01 100.0% 69.1%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.66 58.0 5.26e-01 100.0% 84.2%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 49.0 5.18e-01 100.0% 91.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 4.83e-01 100.0% 71.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.66e-01 100.0% 98.1%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 52.0 4.99e-01 90.9% 95.2%
2vldA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.62 53.0 4.31e-01 98.2% 88.1%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 34.0 3.28e-01 70.9% 45.2%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.62e-01 98.2% 79.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 49.0 4.85e-01 100.0% 86.4%
1b3qB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.26e-01 81.8% 97.1%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 41.0 2.97e-01 72.7% 41.1%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 49.0 3.83e-01 100.0% 90.6%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 44.0 3.50e-01 81.8% 86.7%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 4.37e-01 100.0% 78.2%
2lttA00 2.30.31.70 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.59 41.0 3.77e-01 72.7% 66.2%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.39e-01 100.0% 80.0%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 4.48e-01 90.9% 93.8%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.14e-01 92.7% 69.7%
3bb7A01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.58 50.0 3.55e-01 100.0% 31.6%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 4.28e-01 90.9% 97.3%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.57 39.0 2.62e-01 72.7% 86.4%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.56 48.0 3.48e-01 100.0% 32.4%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 48.0 3.56e-01 100.0% 89.9%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 48.0 4.00e-01 100.0% 95.2%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.56 43.0 3.46e-01 90.9% 55.6%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 43.0 4.11e-01 92.7% 72.7%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 46.0 3.60e-01 92.7% 85.1%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.19e-01 100.0% 68.8%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 41.0 3.25e-01 85.5% 89.2%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 45.0 3.98e-01 96.4% 93.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.58e-01 98.2% 59.4%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 44.0 3.95e-01 90.9% 81.2%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 41.0 3.78e-01 81.8% 64.4%
3e1tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 37.0 2.51e-01 74.5% 34.9%
6fhoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 38.0 2.64e-01 78.2% 71.4%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.53 37.0 2.37e-01 80.0% 23.6%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.98e-01 92.7% 92.5%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.52 42.0 3.44e-01 100.0% 60.3%
1x47A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 3.62e-01 90.9% 88.5%
2ox8A00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 44.0 3.44e-01 100.0% 84.5%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 3.76e-01 94.5% 71.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.52 39.0 3.47e-01 87.3% 87.6%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 3.72e-01 89.1% 85.1%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 3.60e-01 85.5% 87.8%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.77e-01 89.1% 100.0%
2ra9A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 40.0 3.75e-01 94.5% 75.3%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.33e-01 100.0% 94.7%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 39.0 3.75e-01 90.9% 88.6%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 40.0 2.92e-01 96.4% 57.7%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.50 37.0 3.21e-01 83.6% 96.9%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.73 55.0 5.70e-01 98.2% 90.0%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 4.52e-01 100.0% 46.0%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.71 56.0 5.11e-01 100.0% 64.0%
3593899 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.70 63.0 3.94e-01 100.0% 33.4%
3782038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 4.52e-01 100.0% 47.0%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.10e-01 100.0% 68.6%
3699337 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.68 61.0 3.73e-01 100.0% 23.7%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.82e-01 100.0% 69.2%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.66 50.0 4.07e-01 100.0% 43.8%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.65 50.0 4.54e-01 100.0% 61.3%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.65 50.0 4.74e-01 100.0% 70.8%
598 4.1.1.68 ↗ beta barrels › SH3 › SH3 › SH3 › YorP 0.65 56.0 5.15e-01 100.0% 74.6%
4071917 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.63 48.0 5.05e-01 100.0% 90.0%
4284709 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.63 48.0 4.81e-01 100.0% 83.6%
4195627 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.62 51.0 4.92e-01 94.5% 89.2%
3500406 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.62 54.0 3.28e-01 100.0% 19.2%
3385654 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.17e-01 100.0% 64.2%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.61 48.0 4.23e-01 100.0% 57.6%
3424196 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.61 50.0 4.34e-01 90.9% 85.9%
3969587 2.10.1.1 ↗ beta barrels › OB-fold › CheW › CheW › CheW 0.61 45.0 3.44e-01 83.6% 90.3%
3476644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 41.0 4.51e-01 81.8% 97.5%
4929323 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.15e-01 100.0% 78.2%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.60 51.0 3.56e-01 100.0% 30.0%
3659855 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 50.0 4.50e-01 100.0% 93.8%
4566369 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.59 48.0 3.84e-01 90.9% 51.8%
4049072 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.59 47.0 3.78e-01 89.1% 55.5%
4993659 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.59 46.0 3.55e-01 89.1% 43.1%
4970216 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.58 47.0 3.80e-01 90.9% 51.8%
3504513 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.58 46.0 3.70e-01 90.9% 49.6%
4581600 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.57 46.0 3.40e-01 90.9% 38.0%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 46.0 4.26e-01 100.0% 70.7%
3610035 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.57 46.0 3.60e-01 90.9% 48.3%
3839910 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.57 44.0 4.31e-01 89.1% 100.0%
5051419 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 4.34e-01 83.6% 96.4%
3603885 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.56 45.0 3.34e-01 90.9% 38.0%
3387984 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 44.0 3.93e-01 90.9% 80.0%
3498011 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.56 45.0 3.73e-01 92.7% 71.4%
4994758 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.56 44.0 3.58e-01 89.1% 50.9%
3270087 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.56 46.0 3.73e-01 94.5% 62.7%
4204596 3744.1.1.1 ↗ a+b two layers › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › PSII 0.56 48.0 3.79e-01 100.0% 46.7%
4981339 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.56 44.0 3.55e-01 90.9% 49.6%
3581336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 48.0 3.87e-01 100.0% 50.9%
4672063 2.1.1.48 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.55 41.0 4.12e-01 81.8% 98.3%
3924808 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.55 38.0 3.48e-01 74.5% 86.3%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 48.0 4.36e-01 100.0% 73.3%
4073602 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 43.0 3.48e-01 87.3% 47.3%
3921327 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.54 43.0 3.78e-01 92.7% 78.9%
3967128 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 42.0 3.97e-01 87.3% 82.9%
4024623 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.54 43.0 3.92e-01 92.7% 81.2%
3406663 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 43.0 4.49e-01 92.7% 100.0%
4940710 3174.2.1.0 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA 0.53 47.0 4.50e-01 100.0% 89.2%
3242411 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.53 44.0 3.63e-01 98.2% 82.7%
5004517 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.53 37.0 2.57e-01 89.1% 20.0%
4601033 211.1.1.12 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Pfk_N 0.52 38.0 2.79e-01 81.8% 84.6%
3963171 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 36.0 2.24e-01 72.7% 25.5%
3809079 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 41.0 4.06e-01 89.1% 98.3%
5064569 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.52 42.0 3.04e-01 94.5% 85.1%
4237578 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 41.0 3.26e-01 89.1% 50.8%
168736 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.52 40.0 3.85e-01 89.1% 95.5%
4999065 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.51 42.0 3.13e-01 94.5% 95.5%
3854815 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.51 40.0 3.47e-01 92.7% 78.9%
3725260 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 44.0 4.09e-01 100.0% 78.6%
5015321 281.1.1.2 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › ThiP_synth 0.50 38.0 2.95e-01 92.7% 93.8%
4646663 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.50 39.0 3.04e-01 89.1% 46.7%
391151 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.50 37.0 3.12e-01 83.6% 97.1%
D2 high residues 72-119
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 60.0 4.74e-01 100.0% 70.4%
1bqsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 59.0 4.46e-01 100.0% 63.9%
3ihgA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.66 50.0 3.63e-01 85.4% 66.2%
5jeaD00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.65 55.0 3.62e-01 100.0% 24.1%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.65 47.0 3.72e-01 97.9% 37.8%
3cu7A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.65 52.0 4.27e-01 100.0% 62.3%
4ofdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 56.0 4.53e-01 100.0% 68.4%
1b63A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 41.0 2.69e-01 100.0% 14.8%
1l0qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 50.0 4.27e-01 100.0% 52.2%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 52.0 3.78e-01 100.0% 44.2%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.61 51.0 3.96e-01 100.0% 63.0%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.61 42.0 3.63e-01 100.0% 44.3%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 53.0 4.38e-01 100.0% 65.9%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.60 42.0 4.18e-01 97.9% 70.6%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 46.0 3.87e-01 100.0% 45.5%
1ao7B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.11e-01 100.0% 62.0%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 49.0 4.07e-01 100.0% 64.9%
2covG00 2.60.40.2450 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain 0.58 46.0 4.02e-01 100.0% 62.5%
1c7sA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 4.21e-01 100.0% 71.2%
1o97D01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 42.0 2.90e-01 81.2% 89.4%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 3.88e-01 100.0% 69.7%
2kcqA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.56 44.0 3.21e-01 91.7% 66.0%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.56 45.0 4.52e-01 100.0% 90.0%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.73e-01 100.0% 75.5%
6bjqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 3.88e-01 100.0% 93.2%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 2.83e-01 93.8% 85.2%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.53 44.0 3.28e-01 100.0% 43.8%
3hbzA02 2.60.120.890 Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain 0.53 45.0 2.89e-01 100.0% 81.0%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 2.97e-01 79.2% 79.5%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 2.80e-01 83.3% 45.2%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.52 45.0 3.93e-01 100.0% 97.3%
3fgtA01 2.10.70.60 Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 0.51 42.0 4.07e-01 100.0% 89.1%
6ncyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.46e-01 100.0% 64.4%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.51 36.0 3.59e-01 75.0% 100.0%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.82 49.0 3.66e-01 100.0% 26.4%
3906839 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.74 59.0 4.59e-01 100.0% 41.0%
3876467 11.1.1.805 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 0.73 62.0 5.29e-01 97.9% 66.3%
5058907 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 61.0 4.72e-01 100.0% 53.0%
3249366 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 64.0 5.34e-01 100.0% 60.0%
3272311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 60.0 5.29e-01 100.0% 93.3%
3408539 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.68 59.0 4.79e-01 100.0% 50.5%
3385762 4951.1.1.0 ↗ alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit 0.68 59.0 5.05e-01 100.0% 60.0%
4112241 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.68 59.0 4.95e-01 100.0% 56.5%
4233833 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 57.0 3.33e-01 100.0% 16.3%
3625604 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.68 58.0 4.58e-01 100.0% 56.2%
3599646 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.67 58.0 4.76e-01 100.0% 54.4%
4231047 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.67 56.0 4.40e-01 100.0% 47.3%
4017407 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.67 56.0 5.07e-01 100.0% 71.4%
4667581 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.65 57.0 4.66e-01 100.0% 61.1%
5039388 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 52.0 4.62e-01 100.0% 61.3%
4944445 3769.1.1.0 ↗ 0.64 45.0 4.62e-01 79.2% 80.0%
5010446 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 4.41e-01 100.0% 51.1%
5068603 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 52.0 4.46e-01 100.0% 61.2%
5041018 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.61 50.0 4.34e-01 100.0% 61.2%
5070065 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 49.0 4.28e-01 100.0% 57.6%
5071541 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 4.06e-01 100.0% 62.7%
3940192 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.61 50.0 4.29e-01 100.0% 55.7%
5012584 11.1.4.106 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PEGA 0.59 47.0 4.23e-01 100.0% 62.7%
3351103 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.59 45.0 3.34e-01 85.4% 90.4%
1933310 1135.1.1.2 ↗ a+b complex topology › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › IMP2_C 0.59 50.0 4.64e-01 100.0% 98.4%
4031082 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.59 50.0 3.26e-01 100.0% 43.9%
4494590 3223.1.1.1 ↗ beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC 0.59 47.0 2.72e-01 97.9% 11.4%
3997588 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.83e-01 100.0% 48.2%
5012912 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 48.0 3.94e-01 97.9% 67.0%
4090939 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 39.0 3.43e-01 100.0% 43.8%
3709649 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.58 49.0 3.60e-01 100.0% 35.4%
5040138 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.58 44.0 4.07e-01 100.0% 62.9%
4851967 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.58 39.0 3.63e-01 100.0% 54.8%
3992874 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.58 49.0 3.54e-01 100.0% 56.6%
2389920 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.56 45.0 3.90e-01 100.0% 94.3%
2486933 7032.1.1.1 ↗ a+b two layers › Paratox › Paratox › Paratox › Paratox 0.56 38.0 3.57e-01 87.5% 52.9%
4011501 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.56 37.0 2.71e-01 100.0% 22.8%
4004143 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 35.0 3.56e-01 70.8% 90.0%
4424192 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.23e-01 100.0% 39.2%
3953959 4.1.1.424 ↗ beta barrels › SH3 › SH3 › SH3 › PF29823 0.52 33.0 3.35e-01 97.9% 62.0%
3997948 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 43.0 3.08e-01 100.0% 57.4%