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NC_048673.1__YP_009834490.1__HWB28_gp190__00190
Bact-VirNC_048673.1__YP_009834490.1__HWB28_gp190__00190
Identity
- Accession:
- NC_048673 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ceceduovirus›
Aeromonas_phage_AS-zj
TaxID: 2024208
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-86
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3llkA01 | 1.20.120.1960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain | 0.68 | 51.0 | 4.89e-01 | 83.5% | 68.4% |
| 3nvwA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.55 | 40.0 | 4.24e-01 | 88.2% | 90.5% |
| 2kobA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.55 | 44.0 | 4.38e-01 | 92.9% | 96.8% |
| 2cfuA01 | 3.60.15.30 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Metallo-beta-lactamase domain | 0.53 | 38.0 | 2.60e-01 | 76.5% | 68.3% |
| 8gpsA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 35.0 | 3.28e-01 | 72.9% | 77.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3528137 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.57 | 51.0 | 3.94e-01 | 100.0% | 97.4% |
| 5004908 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.56 | 47.0 | 3.68e-01 | 94.1% | 74.2% |
| 3940154 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.52 | 44.0 | 2.94e-01 | 97.6% | 36.5% |
| 4938495 | 304.31.2.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › Substrate-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.51 | 44.0 | 3.50e-01 | 96.5% | 80.0% |