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NC_048674.1__YP_009834845.1__HWB29_gp143__00143
Bact-VirNC_048674.1__YP_009834845.1__HWB29_gp143__00143
Identity
- Accession:
- NC_048674 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ceceduovirus›
Aeromonas_phage_AS-sw
TaxID: 2026113
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-87
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09010.17 best | AsiA | 82.2 | 2.70e-23 | 96.4% | 85.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6k4yI00 | 1.10.1810.10 | Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A | 0.92 | 79.0 | 7.75e-01 | 90.4% | 84.1% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 47.0 | 5.29e-01 | 100.0% | 95.2% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 37.0 | 4.23e-01 | 98.8% | 84.7% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 39.0 | 4.52e-01 | 98.8% | 98.2% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.56 | 41.0 | 4.00e-01 | 98.8% | 69.6% |
| 1dqeA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.56 | 47.0 | 4.06e-01 | 96.4% | 99.3% |
| 1aluA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 39.0 | 3.21e-01 | 73.5% | 91.1% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 46.0 | 3.98e-01 | 92.8% | 91.7% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 33.0 | 3.45e-01 | 72.3% | 67.5% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 34.0 | 3.64e-01 | 85.5% | 82.6% |
| 3jyhA02 | 1.20.120.980 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain | 0.51 | 42.0 | 3.46e-01 | 89.2% | 87.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2792 | 101.1.5.1 ↗ | alpha arrays › HTH › HTH › Anti-sigma factor AsiA › AsiA | 0.87 | 79.0 | 7.69e-01 | 100.0% | 91.0% |
| 3680378 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 54.0 | 5.17e-01 | 100.0% | 91.0% |
| 3786349 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.61 | 45.0 | 4.83e-01 | 95.2% | 91.4% |
| 3203042 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.61 | 52.0 | 4.27e-01 | 96.4% | 85.6% |
| 5060128 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 44.0 | 4.79e-01 | 98.8% | 98.5% |
| 5022395 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.59 | 47.0 | 3.77e-01 | 86.7% | 58.2% |
| 2538 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 40.0 | 4.11e-01 | 89.2% | 75.9% |
| 3456095 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.57 | 35.0 | 3.39e-01 | 100.0% | 53.7% |
| 4941201 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 48.0 | 4.76e-01 | 98.8% | 98.9% |
| 3871164 | 108.1.1.120 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF27858 | 0.55 | 38.0 | 3.39e-01 | 73.5% | 62.4% |
| 3488467 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 38.0 | 3.46e-01 | 91.6% | 52.2% |
| 4061693 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.54 | 42.0 | 3.86e-01 | 85.5% | 66.1% |
| 4012420 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.54 | 42.0 | 3.70e-01 | 85.5% | 66.4% |
| 4266981 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.52 | 44.0 | 4.21e-01 | 100.0% | 81.1% |
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.51 | 32.0 | 3.16e-01 | 72.3% | 58.9% |
| 4932787 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.51 | 45.0 | 3.38e-01 | 100.0% | 75.8% |
| 185329 | 636.1.1.2 ↗ | alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › Sif | 0.51 | 40.0 | 3.11e-01 | 85.5% | 48.7% |
| 3246978 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 46.0 | 4.10e-01 | 100.0% | 78.3% |