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NC_048674.1__YP_009834898.1__HWB29_gp196__00196
Bact-VirNC_048674.1__YP_009834898.1__HWB29_gp196__00196
Identity
- Accession:
- NC_048674 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ceceduovirus›
Aeromonas_phage_AS-sw
TaxID: 2026113
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-93
Domain cluster:
rep: MT234670.1__QIW88495.1__X__00062__D259-340
D2
high
residues 100-161_657-733
Domain cluster:
rep: ON529857.1__USN15519.1__KIKIMORA_04010__00372__D4-134
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.64 | 48.0 | 4.22e-01 | 78.4% | 83.7% |
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.56 | 35.0 | 2.90e-01 | 94.2% | 35.4% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.52 | 33.0 | 3.82e-01 | 92.8% | 93.4% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.52 | 28.0 | 3.50e-01 | 87.8% | 88.6% |
| 1bymA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 23.0 | 2.72e-01 | 97.1% | 55.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3666905 | 222.1.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas | 0.60 | 26.0 | 3.62e-01 | 82.7% | 83.1% |
| 3656110 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.51 | 33.0 | 2.42e-01 | 77.7% | 26.1% |
D3
high
residues 399-518
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.72 | 39.0 | 4.82e-01 | 85.8% | 83.1% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 45.0 | 5.45e-01 | 94.2% | 100.0% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.71 | 42.0 | 5.20e-01 | 94.2% | 100.0% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.67 | 41.0 | 4.84e-01 | 97.5% | 90.0% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 44.0 | 5.18e-01 | 94.2% | 100.0% |
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 46.0 | 4.69e-01 | 98.3% | 72.9% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.65 | 48.0 | 5.35e-01 | 100.0% | 98.9% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.62 | 48.0 | 5.23e-01 | 99.2% | 100.0% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 42.0 | 4.87e-01 | 91.7% | 100.0% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.61 | 47.0 | 5.10e-01 | 99.2% | 100.0% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.61 | 47.0 | 5.10e-01 | 100.0% | 100.0% |
| 6su1D01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.60 | 44.0 | 4.95e-01 | 87.5% | 100.0% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 4.45e-01 | 84.2% | 93.5% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 39.0 | 4.29e-01 | 80.0% | 88.3% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 40.0 | 4.25e-01 | 84.2% | 88.3% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.79e-01 | 97.5% | 90.0% |
| 5trdA02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.53 | 45.0 | 4.39e-01 | 95.0% | 97.0% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 36.0 | 4.10e-01 | 88.3% | 97.7% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.79e-01 | 99.2% | 83.7% |
| 5e4eC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.76e-01 | 100.0% | 84.2% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 29.0 | 3.60e-01 | 90.8% | 97.1% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 3.56e-01 | 86.7% | 75.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 44.0 | 5.02e-01 | 95.0% | 78.9% |
| 4235076 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 45.0 | 5.37e-01 | 94.2% | 91.3% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 48.0 | 5.49e-01 | 95.8% | 91.9% |
| 3642150 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 43.0 | 4.77e-01 | 90.8% | 73.7% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.73 | 43.0 | 5.29e-01 | 90.8% | 94.7% |
| 4072878 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 44.0 | 5.17e-01 | 92.5% | 91.3% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 43.0 | 5.27e-01 | 96.7% | 97.3% |
| 4949095 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.71 | 41.0 | 2.87e-01 | 93.3% | 17.8% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 44.0 | 5.38e-01 | 94.2% | 100.0% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 45.0 | 5.32e-01 | 96.7% | 96.2% |
| 3204011 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 43.0 | 4.85e-01 | 94.2% | 81.1% |
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.69 | 44.0 | 5.24e-01 | 94.2% | 96.2% |
| 5041917 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.67 | 47.0 | 5.25e-01 | 93.3% | 95.6% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 43.0 | 4.99e-01 | 94.2% | 94.1% |
| 3813200 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 48.0 | 4.93e-01 | 95.0% | 79.8% |
| 3221126 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 47.0 | 4.73e-01 | 100.0% | 75.0% |
| 5000763 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 45.0 | 5.08e-01 | 92.5% | 97.8% |
| 3281973 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 47.0 | 5.24e-01 | 99.2% | 100.0% |
| 4927036 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 40.0 | 4.65e-01 | 84.2% | 91.8% |
| 4438946 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 43.0 | 4.92e-01 | 100.0% | 98.8% |
| 4559177 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 48.0 | 5.22e-01 | 95.0% | 100.0% |
| 4025536 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 42.0 | 4.59e-01 | 98.3% | 85.0% |
| 3596767 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.61 | 48.0 | 5.14e-01 | 100.0% | 100.0% |
| 4066771 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 42.0 | 4.63e-01 | 100.0% | 90.5% |
| 4353877 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 43.0 | 4.68e-01 | 100.0% | 91.6% |
| 4163756 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.60 | 42.0 | 4.62e-01 | 100.0% | 91.6% |
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.60 | 39.0 | 4.14e-01 | 80.0% | 75.2% |
| 4551207 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.60 | 45.0 | 4.66e-01 | 100.0% | 85.5% |
| 3177101 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.60 | 47.0 | 5.09e-01 | 99.2% | 100.0% |
| 4553723 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.59 | 42.0 | 4.66e-01 | 100.0% | 92.6% |
| 5043602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 40.0 | 4.41e-01 | 100.0% | 87.4% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 40.0 | 4.32e-01 | 80.0% | 84.0% |
| 3489228 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 43.0 | 4.63e-01 | 94.2% | 93.0% |
| 3636460 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.57 | 47.0 | 3.28e-01 | 95.0% | 26.4% |
| 3196339 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 43.0 | 4.20e-01 | 95.0% | 72.3% |
| 4234560 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.57 | 43.0 | 4.19e-01 | 86.7% | 70.4% |
| 3972759 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 46.0 | 4.80e-01 | 95.0% | 96.4% |
| 3975943 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.56 | 37.0 | 4.17e-01 | 100.0% | 88.9% |
| 4071075 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.56 | 38.0 | 4.06e-01 | 80.0% | 80.0% |
| 3250946 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.28e-01 | 98.3% | 92.6% |
| None | — | 0.54 | 43.0 | 3.06e-01 | 92.5% | 29.4% | |
| 4027777 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 46.0 | 4.25e-01 | 95.0% | 81.3% |
| 4830343 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 33.0 | 3.59e-01 | 78.3% | 75.5% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 40.0 | 4.20e-01 | 84.2% | 92.4% |
| 3738494 | 11.2.1.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_Mug190_3rd | 0.51 | 40.0 | 3.74e-01 | 84.2% | 69.3% |
| 4371063 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.99e-01 | 82.5% | 93.0% |
D4
medium
residues 162-307_319-340_611-656
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qa1A02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 17.0 | 2.95e-01 | 97.2% | 59.5% |
| 3q6kA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 57.0 | 4.66e-01 | 94.9% | 97.1% |
| 2w5nA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 53.0 | 4.40e-01 | 94.9% | 97.0% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 52.0 | 4.44e-01 | 94.9% | 97.7% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 51.0 | 4.25e-01 | 93.0% | 100.0% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 52.0 | 4.39e-01 | 94.9% | 96.8% |
| 1sil000 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 51.0 | 4.23e-01 | 95.8% | 97.6% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 50.0 | 4.33e-01 | 92.5% | 100.0% |
| 1gxrA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 4.38e-01 | 95.3% | 89.6% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 4.13e-01 | 86.0% | 75.6% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 4.18e-01 | 91.1% | 96.9% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 45.0 | 4.23e-01 | 86.9% | 69.7% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 4.23e-01 | 93.5% | 99.7% |
| 4a17E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.56 | 20.0 | 2.97e-01 | 97.2% | 72.9% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 49.0 | 4.41e-01 | 94.9% | 99.7% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 4.10e-01 | 92.5% | 87.3% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 47.0 | 3.74e-01 | 93.5% | 96.7% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 4.06e-01 | 93.9% | 100.0% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 48.0 | 4.38e-01 | 94.4% | 94.7% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 48.0 | 4.16e-01 | 94.9% | 95.1% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 48.0 | 4.26e-01 | 93.9% | 100.0% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 49.0 | 4.20e-01 | 96.3% | 100.0% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 23.0 | 3.45e-01 | 95.8% | 91.4% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 3.82e-01 | 86.9% | 89.3% |
| 4j0xA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.92e-01 | 93.9% | 88.8% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 46.0 | 3.98e-01 | 91.1% | 98.5% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 4.11e-01 | 92.5% | 89.9% |
| 1sqjB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 3.77e-01 | 86.0% | 73.9% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 43.0 | 3.80e-01 | 84.6% | 80.1% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 4.13e-01 | 94.4% | 97.3% |
| 5flwA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 45.0 | 3.98e-01 | 90.7% | 81.8% |
| 6p2lA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 3.76e-01 | 86.0% | 72.5% |
| 2ghsA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 4.11e-01 | 94.4% | 95.3% |
| 5tw4A02 | 2.30.140.20 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Penicillin-binding protein 4, C-terminal domain | 0.52 | 16.0 | 2.66e-01 | 93.5% | 73.9% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 4.07e-01 | 95.8% | 97.4% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 21.0 | 2.89e-01 | 96.7% | 73.5% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.85e-01 | 93.0% | 88.8% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.82e-01 | 93.9% | 98.8% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 44.0 | 3.88e-01 | 93.0% | 96.8% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1779595 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.84 | 77.0 | 6.18e-01 | 93.9% | 100.0% |
| 3407288 | 5.1.4.433 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS3_N | 0.60 | 54.0 | 4.22e-01 | 94.4% | 99.3% |
| 5041468 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 49.0 | 3.84e-01 | 84.6% | 90.0% |
| 5038973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 4.36e-01 | 93.9% | 98.9% |
| 3613168 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.58 | 51.0 | 4.16e-01 | 94.4% | 95.2% |
| 2391102 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 53.0 | 4.24e-01 | 98.1% | 95.6% |
| 3888391 | 5.1.4.325 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30552 | 0.57 | 49.0 | 4.10e-01 | 89.3% | 95.1% |
| 3595735 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 4.24e-01 | 95.8% | 95.9% |
| 4029119 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 43.0 | 3.63e-01 | 77.6% | 58.6% |
| 4956008 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.57 | 49.0 | 4.15e-01 | 92.5% | 95.8% |
| 3601003 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 50.0 | 3.81e-01 | 95.3% | 95.0% |
| 3550096 | 5.1.4.425 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st | 0.57 | 50.0 | 4.19e-01 | 93.5% | 100.0% |
| 5062116 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 50.0 | 4.57e-01 | 94.4% | 98.6% |
| None | — | 0.56 | 50.0 | 4.17e-01 | 94.4% | 97.8% | |
| 4300107 | 5.1.5.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_IFT122_1st | 0.56 | 50.0 | 4.19e-01 | 93.9% | 96.6% |
| 3938829 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 3.82e-01 | 90.7% | 96.2% |
| 3702308 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 45.0 | 3.55e-01 | 84.6% | 77.3% |
| 2702181 | 5.1.4.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ,PQQ_2 | 0.56 | 49.0 | 3.86e-01 | 93.9% | 87.9% |
| 3254075 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 45.0 | 3.77e-01 | 83.6% | 82.9% |
| 4466630 | 5.1.4.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sortilin-Vps10 | 0.56 | 48.0 | 3.04e-01 | 92.1% | 50.6% |
| 3288025 | 5.1.3.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PhoX | 0.56 | 50.0 | 4.16e-01 | 95.8% | 93.2% |
| 3853122 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.56 | 49.0 | 4.15e-01 | 95.3% | 83.1% |
| 3302115 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.56 | 50.0 | 4.44e-01 | 95.8% | 96.1% |
| 3814929 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.56 | 49.0 | 4.42e-01 | 94.4% | 98.6% |
| 3624688 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.56 | 50.0 | 4.32e-01 | 95.8% | 96.2% |
| 3829885 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 45.0 | 3.91e-01 | 85.5% | 85.2% |
| 3793300 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 47.0 | 3.73e-01 | 91.1% | 95.5% |
| 3458254 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 50.0 | 4.29e-01 | 97.7% | 97.7% |
| 3442234 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 3.98e-01 | 93.0% | 83.7% |
| 3698275 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 3.68e-01 | 93.5% | 86.2% |
| 3719566 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 3.99e-01 | 85.0% | 65.3% |
| 3586471 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.96e-01 | 96.7% | 90.8% |
| 4959306 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 48.0 | 4.12e-01 | 93.5% | 90.7% |
| 3616631 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 3.66e-01 | 91.6% | 93.5% |
| 3869017 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.99e-01 | 95.8% | 84.1% |
| 3261418 | 5.1.4.453 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.55 | 48.0 | 3.96e-01 | 93.9% | 96.8% |
| 3174725 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 47.0 | 3.88e-01 | 91.6% | 95.5% |
| 3406442 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 3.64e-01 | 85.0% | 63.4% |
| 3613906 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.90e-01 | 92.1% | 82.4% |
| 3827259 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.54 | 48.0 | 4.37e-01 | 94.4% | 100.0% |
| 3402824 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.54 | 48.0 | 3.87e-01 | 94.9% | 92.2% |
| 3753962 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.54 | 47.0 | 3.95e-01 | 93.0% | 93.9% |
| 3844416 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.54 | 47.0 | 3.82e-01 | 92.1% | 90.5% |
| 3523247 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.54 | 48.0 | 4.30e-01 | 94.4% | 96.9% |
| 3264341 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.54 | 44.0 | 3.80e-01 | 84.6% | 80.9% |
| 3225189 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.54 | 47.0 | 3.15e-01 | 94.4% | 95.7% |
| 3903931 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.54 | 48.0 | 4.18e-01 | 95.3% | 98.7% |
| 3789270 | 5.1.4.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CRT10 | 0.53 | 46.0 | 3.44e-01 | 92.1% | 86.2% |
| 3321190 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 44.0 | 3.76e-01 | 86.0% | 67.6% |
| 3927304 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 46.0 | 3.80e-01 | 92.1% | 77.6% |
| 3989333 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 14.0 | 2.82e-01 | 96.7% | 85.0% |
| 4508539 | 5.1.7.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 | 0.53 | 47.0 | 3.44e-01 | 95.3% | 95.7% |
| 3933565 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.53 | 45.0 | 3.72e-01 | 90.7% | 86.1% |
| 3917082 | 5.1.4.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st | 0.53 | 46.0 | 3.85e-01 | 92.5% | 89.4% |
| 3323488 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 43.0 | 3.80e-01 | 84.6% | 89.7% |
| 3232370 | 5.1.3.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 | 0.53 | 46.0 | 3.90e-01 | 94.9% | 90.3% |
| 3917456 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.52 | 47.0 | 3.71e-01 | 95.3% | 79.3% |
| 4039417 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.52 | 46.0 | 4.16e-01 | 95.8% | 97.3% |
| 3516666 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.52 | 43.0 | 4.11e-01 | 87.9% | 83.9% |
| 3684112 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.52 | 46.0 | 4.02e-01 | 95.8% | 100.0% |
| 3453043 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.52 | 46.0 | 4.02e-01 | 94.4% | 78.1% |
| 3212280 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 3.67e-01 | 93.9% | 89.9% |
| 4267686 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.52 | 45.0 | 4.11e-01 | 95.3% | 95.9% |
| 3996624 | 5.1.5.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd | 0.52 | 42.0 | 3.49e-01 | 85.5% | 52.0% |
| 4059013 | 5.1.4.481 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR, Sortilin-Vps10 | 0.51 | 45.0 | 2.86e-01 | 92.5% | 45.3% |
| 3436392 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 46.0 | 3.91e-01 | 97.2% | 74.5% |
| 3844453 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.51 | 46.0 | 4.26e-01 | 97.2% | 98.9% |
| 4302400 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.51 | 44.0 | 3.24e-01 | 91.6% | 93.0% |
| 3831707 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 45.0 | 3.82e-01 | 96.3% | 84.2% |
| 2067658 | 5.1.3.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b, DUF5050 | 0.51 | 46.0 | 4.23e-01 | 97.2% | 99.3% |
| 3423257 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.50 | 46.0 | 3.86e-01 | 99.1% | 76.1% |
| 3866163 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.50 | 46.0 | 4.28e-01 | 99.5% | 99.3% |
| 3703426 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 3.73e-01 | 88.3% | 81.0% |
D5
medium
residues 308-318_341-398_523-549
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.64 | 41.0 | 3.85e-01 | 83.3% | 53.4% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 33.0 | 4.05e-01 | 71.9% | 81.7% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.62 | 36.0 | 4.44e-01 | 80.2% | 98.2% |
| 4l1nA00 | 2.40.128.660 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 | 0.59 | 53.0 | 4.46e-01 | 100.0% | 64.0% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 3.54e-01 | 75.0% | 57.0% |
| 1sqjB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 53.0 | 3.40e-01 | 100.0% | 23.4% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 53.0 | 3.49e-01 | 100.0% | 31.3% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 43.0 | 4.09e-01 | 79.2% | 98.3% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 50.0 | 3.57e-01 | 100.0% | 41.8% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 46.0 | 3.49e-01 | 86.5% | 74.1% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 52.0 | 3.60e-01 | 100.0% | 31.7% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.57 | 44.0 | 4.05e-01 | 83.3% | 87.3% |
| 3os7A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 44.0 | 3.05e-01 | 85.4% | 95.0% |
| 1kzlA02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 32.0 | 3.17e-01 | 72.9% | 53.5% |
| 1nu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.92e-01 | 89.6% | 82.1% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.57e-01 | 100.0% | 42.0% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 42.0 | 3.10e-01 | 84.4% | 93.3% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 38.0 | 2.78e-01 | 74.0% | 43.5% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.92e-01 | 84.4% | 98.4% |
| 1u4cB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.27e-01 | 100.0% | 28.5% |
| 3gzbA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.76e-01 | 88.5% | 85.1% |
| 4lgqA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.87e-01 | 86.5% | 94.7% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.81e-01 | 88.5% | 90.1% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 31.0 | 3.49e-01 | 71.9% | 73.7% |
| 3cmbA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.53 | 41.0 | 3.02e-01 | 83.3% | 79.6% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.87e-01 | 88.5% | 96.1% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.52 | 36.0 | 3.25e-01 | 70.8% | 96.2% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.95e-01 | 89.6% | 98.4% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.81e-01 | 88.5% | 96.9% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.92e-01 | 86.5% | 95.5% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 45.0 | 3.36e-01 | 99.0% | 89.4% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.65e-01 | 78.1% | 94.5% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 28.0 | 3.07e-01 | 79.2% | 63.3% |
| 1h54B01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 42.0 | 3.19e-01 | 96.9% | 85.9% |
| 2v5oA05 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.51 | 40.0 | 3.57e-01 | 86.5% | 80.7% |
| 7c5yA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.39e-01 | 84.4% | 100.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953814 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 41.0 | 5.01e-01 | 79.2% | 100.0% |
| 4978439 | 5.1.2.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF4185 | 0.65 | 58.0 | 3.95e-01 | 100.0% | 46.3% |
| 3296838 | 4099.1.1.14 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C | 0.61 | 33.0 | 3.41e-01 | 72.9% | 52.6% |
| 3248810 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.61 | 55.0 | 3.56e-01 | 100.0% | 44.3% |
| 5074243 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 47.0 | 4.74e-01 | 89.6% | 85.3% |
| 3867302 | 5.1.4.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 | 0.59 | 53.0 | 3.54e-01 | 100.0% | 48.0% |
| 3921144 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.58 | 51.0 | 3.45e-01 | 100.0% | 26.8% |
| 5038083 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.58 | 41.0 | 3.76e-01 | 85.4% | 56.5% |
| 3257301 | 211.1.1.2 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › YecM | 0.57 | 34.0 | 3.28e-01 | 89.6% | 51.8% |
| 5038625 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.57 | 51.0 | 3.28e-01 | 100.0% | 25.6% |
| 3950370 | 881.4.1.3 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4245 | 0.56 | 38.0 | 3.28e-01 | 77.1% | 43.2% |
| 4011273 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 38.0 | 3.12e-01 | 70.8% | 54.4% |
| 3595120 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 43.0 | 3.11e-01 | 84.4% | 53.4% |
| 4944615 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.54 | 39.0 | 2.76e-01 | 75.0% | 27.4% |
| 4596146 | 243.1.1.104 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 | 0.54 | 43.0 | 3.89e-01 | 86.5% | 95.4% |
| 5044537 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.54 | 38.0 | 4.08e-01 | 86.5% | 87.5% |
| 3415902 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 47.0 | 3.11e-01 | 100.0% | 24.8% |
| 5055337 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 43.0 | 3.67e-01 | 88.5% | 56.9% |
| 3960378 | 3504.2.1.0 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins | 0.53 | 37.0 | 3.56e-01 | 72.9% | 79.1% |
| 4018215 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.53 | 37.0 | 2.38e-01 | 72.9% | 36.9% |
| 3719200 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.52 | 41.0 | 2.83e-01 | 84.4% | 46.8% |
| 4996733 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.51 | 36.0 | 4.08e-01 | 80.2% | 100.0% |
| 3750274 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.51 | 40.0 | 3.56e-01 | 86.5% | 79.3% |
| 4929353 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.51 | 41.0 | 2.78e-01 | 86.5% | 44.0% |
| 3511505 | 9.23.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › DUF7042 | 0.51 | 38.0 | 3.54e-01 | 83.3% | 63.3% |
| 3273857 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.50 | 38.0 | 3.41e-01 | 83.3% | 56.5% |
| 5022722 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.50 | 34.0 | 3.72e-01 | 94.8% | 88.0% |
D6
medium
residues 550-610
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.51 | 42.0 | 3.02e-01 | 100.0% | 29.9% |
D7
medium
residues 881-957
Domain cluster:
rep: KU873925.1__AND75135.1__pf16_212__00211__D127-217_359-371
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21427.3 best | Gp7_5th | 123.6 | 3.90e-36 | 100.0% | 81.0% |
D8
medium
residues 1011-1074_1116-1167