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NC_048674.1__YP_009835010.1__HWB29_gp308__00308

Bact-Vir

NC_048674.1__YP_009835010.1__HWB29_gp308__00308

Identity

Accession:
NC_048674 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Ceceduovirus› Aeromonas_phage_AS-sw

TaxID: 2026113

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-83
PDB
Domain cluster: rep: OP380596.1__UYD57999.1__GHHBBDOD_00144__00128__D6-75
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 47.0 5.53e-01 100.0% 96.2%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 47.0 4.07e-01 100.0% 44.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 43.0 5.20e-01 100.0% 98.0%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.70 44.0 3.75e-01 100.0% 39.2%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.70 55.0 5.55e-01 100.0% 84.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 4.86e-01 100.0% 80.6%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 42.0 4.43e-01 100.0% 69.1%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 42.0 4.47e-01 100.0% 71.2%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 5.39e-01 100.0% 95.0%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 42.0 3.54e-01 100.0% 37.4%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 53.0 5.45e-01 100.0% 89.2%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 47.0 4.86e-01 100.0% 79.2%
2btwA00 3.90.70.30 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain 0.65 53.0 3.85e-01 100.0% 32.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 42.0 4.57e-01 100.0% 78.5%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 5.01e-01 100.0% 96.5%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 4.68e-01 100.0% 80.0%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.88e-01 100.0% 94.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 45.0 4.74e-01 100.0% 86.6%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 42.0 4.06e-01 100.0% 61.6%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.31e-01 100.0% 81.7%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 4.08e-01 100.0% 65.1%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 45.0 4.63e-01 100.0% 82.7%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 45.0 4.87e-01 100.0% 96.9%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.32e-01 100.0% 86.2%
1k5dB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.94e-01 92.2% 78.1%
3oisB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 51.0 3.48e-01 100.0% 30.0%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.53 44.0 3.55e-01 94.8% 48.1%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 3.82e-01 94.8% 71.4%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 43.0 3.67e-01 100.0% 79.3%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 48.0 4.10e-01 100.0% 41.7%
3274582 4.1.1.365 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.74 45.0 5.18e-01 100.0% 85.5%
3172078 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 55.0 3.79e-01 100.0% 25.0%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 45.0 5.15e-01 100.0% 85.5%
3798859 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 44.0 4.22e-01 100.0% 52.2%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 46.0 3.51e-01 98.7% 28.0%
3938261 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.73 44.0 3.55e-01 100.0% 31.3%
3917568 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 45.0 3.89e-01 100.0% 41.7%
3756428 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.72 44.0 4.05e-01 100.0% 47.0%
3780847 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.72 46.0 3.70e-01 100.0% 34.0%
4118011 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.72 53.0 5.13e-01 100.0% 70.6%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 46.0 2.82e-01 98.7% 11.1%
4984882 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.71 45.0 4.69e-01 100.0% 70.0%
3440094 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.71 45.0 5.04e-01 100.0% 83.3%
3296833 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.71 46.0 3.78e-01 100.0% 37.0%
3719595 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 5.03e-01 100.0% 85.0%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.70 45.0 3.82e-01 100.0% 39.2%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 4.04e-01 100.0% 47.6%
3885049 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.70 44.0 5.01e-01 100.0% 89.1%
3555930 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.70 45.0 4.68e-01 100.0% 71.4%
3840677 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 44.0 4.02e-01 100.0% 49.0%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.70 48.0 5.05e-01 100.0% 78.6%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 3.60e-01 100.0% 34.5%
3787586 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 44.0 3.94e-01 100.0% 46.7%
4927532 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.69 49.0 4.13e-01 100.0% 45.6%
3251940 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 45.0 4.57e-01 100.0% 68.0%
3195050 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 43.0 4.05e-01 100.0% 51.6%
3222146 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 44.0 4.72e-01 100.0% 76.9%
3922903 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.69 44.0 4.93e-01 100.0% 85.0%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 45.0 5.02e-01 100.0% 86.7%
4059465 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 45.0 4.77e-01 100.0% 76.5%
3926175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.30e-01 100.0% 60.0%
4524466 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 42.0 4.41e-01 100.0% 68.6%
3482868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 47.0 5.36e-01 100.0% 100.0%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.88e-01 100.0% 85.0%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.11e-01 100.0% 86.2%
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.68 45.0 3.89e-01 100.0% 44.2%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.68 47.0 5.08e-01 100.0% 86.2%
3790897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.03e-01 100.0% 51.0%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.67 46.0 4.44e-01 100.0% 63.5%
3703970 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 4.90e-01 100.0% 63.8%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.66 42.0 3.31e-01 100.0% 30.3%
3397845 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 49.0 4.42e-01 100.0% 58.1%
3751502 4.1.1.365 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.66 42.0 4.43e-01 100.0% 72.9%
4263339 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.65 47.0 4.65e-01 100.0% 72.5%
3880325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 44.0 4.65e-01 98.7% 78.6%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 48.0 5.21e-01 98.7% 93.8%
3227009 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.64 43.0 4.37e-01 100.0% 70.7%
3615364 219.1.1.26 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin 0.64 55.0 4.09e-01 100.0% 37.9%
4614716 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.64 53.0 5.50e-01 98.7% 97.1%
3703932 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.74e-01 100.0% 88.3%
3698582 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 46.0 4.85e-01 100.0% 84.3%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.63 43.0 4.46e-01 100.0% 77.1%
3599666 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 55.0 3.41e-01 100.0% 16.8%
3714904 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 53.0 3.22e-01 100.0% 15.2%
3593474 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 55.0 4.00e-01 100.0% 36.2%
3590884 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.61 45.0 3.84e-01 100.0% 45.9%
3272363 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.61 44.0 4.10e-01 100.0% 61.1%
3772638 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.60 42.0 4.23e-01 100.0% 71.6%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.57e-01 100.0% 89.1%
4882197 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.59 44.0 3.93e-01 100.0% 53.4%
3781440 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.59 42.0 4.17e-01 100.0% 71.2%
3615365 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 49.0 3.51e-01 100.0% 30.4%
4304846 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.59 46.0 4.19e-01 100.0% 64.0%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.58 50.0 3.99e-01 100.0% 47.1%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 52.0 4.76e-01 98.7% 96.0%
3700484 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 52.0 3.57e-01 100.0% 38.8%
3491785 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 52.0 4.55e-01 100.0% 67.0%
3492018 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 3.83e-01 100.0% 57.1%
4400641 4.1.1.397 ↗ beta barrels › SH3 › SH3 › SH3 › PF29622 0.57 48.0 4.82e-01 100.0% 88.7%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 3.09e-01 100.0% 28.4%
3625263 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 43.0 3.99e-01 100.0% 64.0%
3678872 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.56 44.0 4.54e-01 100.0% 88.0%
3698096 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.55 49.0 3.74e-01 100.0% 43.3%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 49.0 3.99e-01 100.0% 53.6%
5081683 2002.3.1.3 ↗ a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.54 47.0 2.97e-01 97.4% 38.6%
3514524 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.54 49.0 3.94e-01 100.0% 75.2%
4260092 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.53 38.0 3.84e-01 87.0% 75.0%
3937468 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.86e-01 92.2% 89.1%
3227570 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.52 42.0 3.36e-01 93.5% 60.0%
3630687 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.42e-01 93.5% 67.3%