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NC_048674.1__YP_009835031.1__HWB29_gp329__00329
Bact-VirNC_048674.1__YP_009835031.1__HWB29_gp329__00329
Identity
- Accession:
- NC_048674 ↗
- Kingdom:
- phage
Quality
93.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ceceduovirus›
Aeromonas_phage_AS-sw
TaxID: 2026113
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.58 | 50.0 | 4.21e-01 | 100.0% | 93.2% |
| 1lwuC01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.57 | 35.0 | 2.87e-01 | 84.0% | 33.1% |
| 2k31A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 43.0 | 3.60e-01 | 82.7% | 68.5% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 38.0 | 2.56e-01 | 70.4% | 19.8% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 38.0 | 3.44e-01 | 72.8% | 58.8% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 31.0 | 3.14e-01 | 87.7% | 51.8% |
| 4jpqA00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.14e-01 | 86.4% | 64.4% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 35.0 | 3.81e-01 | 76.5% | 82.1% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 38.0 | 3.50e-01 | 77.8% | 94.5% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 42.0 | 3.29e-01 | 100.0% | 41.1% |
| 2knrA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.51 | 37.0 | 3.30e-01 | 76.5% | 64.4% |
| 3x27A01 | 2.40.100.20 | Mainly Beta › Beta Barrel › Cyclophilin › | 0.50 | 40.0 | 3.34e-01 | 88.9% | 71.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2491495 | 7035.1.1.2 ↗ | beta barrels › Cuben fold of PcncAAAD › Cuben fold of PcncAAAD › Cuben fold of PcncAAAD › PF31270 | 0.63 | 40.0 | 3.26e-01 | 82.7% | 33.5% |
| 3786800 | 3863.1.1.0 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) | 0.63 | 52.0 | 4.55e-01 | 100.0% | 59.7% |
| 3633382 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.62 | 38.0 | 3.08e-01 | 96.3% | 31.6% |
| 3484705 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.58 | 51.0 | 4.31e-01 | 98.8% | 90.0% |
| 3478332 | 206.1.3.47 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Citrate_synth_N | 0.56 | 43.0 | 3.08e-01 | 85.2% | 39.5% |
| 3888482 | 206.1.3.47 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Citrate_synth_N | 0.56 | 43.0 | 3.10e-01 | 85.2% | 36.7% |
| 3704921 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 49.0 | 3.98e-01 | 100.0% | 85.2% |
| 3512127 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.54 | 39.0 | 3.56e-01 | 77.8% | 85.2% |
| 4158830 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.54 | 44.0 | 3.87e-01 | 93.8% | 80.0% |
| 3575394 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.53 | 48.0 | 3.90e-01 | 100.0% | 92.7% |
| 4975654 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.53 | 41.0 | 2.99e-01 | 84.0% | 46.4% |
| 4113861 | 236.2.1.1 ↗ | beta barrels › GroES-like › SacY-like RNA-binding domain › SacY-like RNA-binding domain › CAT_RBD | 0.53 | 29.0 | 3.26e-01 | 81.5% | 70.9% |
| 4007507 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.52 | 40.0 | 3.06e-01 | 82.7% | 49.7% |
| 3799917 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.52 | 39.0 | 2.77e-01 | 80.2% | 67.5% |
| 3649484 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.52 | 45.0 | 3.69e-01 | 100.0% | 91.3% |
| 3637683 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 45.0 | 3.42e-01 | 100.0% | 73.8% |
| 3297150 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 37.0 | 3.58e-01 | 82.7% | 94.0% |
| 4181726 | 76.1.1.2 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin | 0.50 | 38.0 | 3.11e-01 | 84.0% | 61.6% |