←Back to structures
NC_048679.1__YP_009835506.1__HWB34_gp31__00031
Bact-VirNC_048679.1__YP_009835506.1__HWB34_gp31__00031
Identity
- Accession:
- NC_048679 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Taxonomy
TaxID: 2041383
Cluster
View cluster (49 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 497-573
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.78 | 50.0 | 5.26e-01 | 100.0% | 72.5% |
| 2jiiA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 40.0 | 3.00e-01 | 72.7% | 55.0% |
| 5xzwA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 40.0 | 3.29e-01 | 79.2% | 76.6% |
| 4b6lA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 40.0 | 3.07e-01 | 84.4% | 57.8% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.50 | 22.0 | 2.96e-01 | 83.1% | 75.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3712098 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 3.33e-01 | 88.3% | 38.6% |
| 4965179 | 5040.1.1.0 ↗ | extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region | 0.55 | 39.0 | 4.00e-01 | 75.3% | 98.7% |
| 4012542 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 35.0 | 2.34e-01 | 97.4% | 16.4% |
| 3277617 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 40.0 | 3.62e-01 | 79.2% | 100.0% |
| 3480307 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.52 | 31.0 | 3.11e-01 | 96.1% | 55.0% |
| 3932006 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 39.0 | 3.42e-01 | 79.2% | 81.7% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 44.0 | 2.94e-01 | 97.4% | 32.3% |
| 3716174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.52 | 40.0 | 3.51e-01 | 81.8% | 82.7% |
| 4045124 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.51 | 45.0 | 3.10e-01 | 100.0% | 56.4% |
D2
medium
residues 23-101
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.86 | 69.0 | 4.82e-01 | 86.1% | 30.0% |
| 3hxlA01 | 3.30.1490.360 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.75 | 55.0 | 6.01e-01 | 82.3% | 95.3% |
| 5ijaA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.64 | 50.0 | 4.11e-01 | 84.8% | 89.2% |
| 3r9pB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 52.0 | 4.05e-01 | 92.4% | 85.3% |
| 1cfzA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.63 | 48.0 | 3.89e-01 | 84.8% | 75.9% |
| 3kzwA02 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.63 | 49.0 | 3.21e-01 | 83.5% | 64.7% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.56 | 45.0 | 3.48e-01 | 88.6% | 59.7% |
| 3hzrA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 39.0 | 2.75e-01 | 89.9% | 22.4% |
| 4dvjB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.55 | 37.0 | 2.84e-01 | 70.9% | 97.4% |
| 3e35A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.54 | 41.0 | 3.03e-01 | 83.5% | 76.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.87 | 71.0 | 4.68e-01 | 84.8% | 25.8% |
| 2095487 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.85 | 65.0 | 7.25e-01 | 81.0% | 100.0% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 67.0 | 4.52e-01 | 86.1% | 25.9% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.81 | 62.0 | 4.19e-01 | 83.5% | 24.5% |
| 4917768 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.79 | 68.0 | 4.70e-01 | 92.4% | 73.1% |
| 3948874 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.70 | 54.0 | 3.86e-01 | 83.5% | 28.3% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.69 | 52.0 | 3.77e-01 | 82.3% | 28.4% |
| 1180325 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.68 | 58.0 | 5.70e-01 | 93.7% | 86.0% |
| 4981771 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.67 | 51.0 | 3.93e-01 | 82.3% | 83.3% |
| 5058071 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.64 | 49.0 | 4.15e-01 | 83.5% | 49.2% |
| 5055616 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.63 | 48.0 | 3.89e-01 | 82.3% | 75.8% |
| 3783380 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.63 | 50.0 | 3.55e-01 | 89.9% | 27.5% |
| 4955006 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.63 | 48.0 | 4.12e-01 | 83.5% | 60.0% |
| 5068385 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.61 | 47.0 | 4.17e-01 | 84.8% | 83.3% |
| 5064343 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.61 | 47.0 | 3.86e-01 | 86.1% | 78.1% |
| 5050574 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.60 | 45.0 | 3.45e-01 | 83.5% | 60.0% |
| 5083909 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.59 | 45.0 | 3.71e-01 | 83.5% | 84.8% |
| 5016476 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.58 | 45.0 | 3.60e-01 | 84.8% | 86.1% |
| 5006656 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.58 | 44.0 | 3.65e-01 | 84.8% | 83.2% |
| 4944518 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.58 | 44.0 | 3.66e-01 | 83.5% | 89.0% |
| 5074511 | 2011.2.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF1512_C | 0.58 | 41.0 | 3.21e-01 | 86.1% | 34.7% |
| 4986230 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.57 | 44.0 | 3.97e-01 | 84.8% | 58.3% |
| 4934595 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.57 | 43.0 | 3.58e-01 | 83.5% | 88.0% |
| 3186763 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.57 | 46.0 | 3.76e-01 | 89.9% | 71.3% |
| 4947938 | 2011.2.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF1512_C | 0.56 | 40.0 | 3.12e-01 | 84.8% | 33.3% |
| 4289183 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.56 | 35.0 | 2.83e-01 | 86.1% | 31.6% |
| 3828361 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 35.0 | 2.44e-01 | 89.9% | 18.5% |
| 3360084 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.54 | 41.0 | 3.25e-01 | 83.5% | 55.4% |
| 4052375 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.54 | 35.0 | 2.89e-01 | 86.1% | 34.0% |
| 3388088 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.54 | 32.0 | 2.77e-01 | 82.3% | 34.3% |
| 5041467 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.54 | 41.0 | 2.99e-01 | 84.8% | 71.7% |
| 4025265 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.53 | 31.0 | 2.85e-01 | 78.5% | 41.0% |
| 4157395 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.53 | 36.0 | 2.87e-01 | 70.9% | 93.9% |
| 5048084 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.53 | 41.0 | 3.09e-01 | 86.1% | 33.0% |
| 5020601 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.52 | 37.0 | 2.96e-01 | 77.2% | 97.3% |
| 4942332 | 2011.2.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF1512_C | 0.52 | 41.0 | 3.08e-01 | 84.8% | 35.5% |
| 3402664 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.50 | 36.0 | 2.40e-01 | 77.2% | 76.9% |
| 4068091 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.50 | 38.0 | 3.06e-01 | 83.5% | 95.9% |
D3
medium
residues 102-131_210-283
Domain cluster:
rep: NC_062752.1__YP_010357330.1__M1M30_gp081__00081__D107-196
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.37e-01 | 72.1% | 95.4% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.53 | 39.0 | 3.34e-01 | 78.8% | 71.8% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 39.0 | 3.68e-01 | 80.8% | 90.7% |
| 2vn4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.39e-01 | 70.2% | 91.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995821 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.81 | 78.0 | 6.53e-01 | 100.0% | 90.6% |
| 4957557 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.81 | 70.0 | 6.89e-01 | 100.0% | 86.4% |
| 3171492 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 42.0 | 3.70e-01 | 83.7% | 89.7% |
| 4408024 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.54 | 26.0 | 3.33e-01 | 87.5% | 80.0% |
| 4349950 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 27.0 | 3.32e-01 | 87.5% | 81.7% |
| 3408332 | 633.23.1.3 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › L_HMGIC_fpl | 0.52 | 41.0 | 3.37e-01 | 85.6% | 83.9% |
| 3499768 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 39.0 | 2.75e-01 | 82.7% | 90.1% |
| 4986651 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 29.0 | 3.30e-01 | 99.0% | 76.0% |
D4
medium
residues 132-209
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.77 | 62.0 | 5.94e-01 | 94.9% | 75.6% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.77 | 63.0 | 6.54e-01 | 94.9% | 97.2% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.76 | 66.0 | 6.23e-01 | 94.9% | 94.7% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.76 | 68.0 | 6.60e-01 | 98.7% | 98.9% |
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.76 | 63.0 | 5.03e-01 | 89.7% | 84.6% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 67.0 | 5.66e-01 | 100.0% | 74.8% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 66.0 | 6.28e-01 | 94.9% | 94.4% |
| 3e1yE01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 63.0 | 6.16e-01 | 93.6% | 97.7% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 64.0 | 6.18e-01 | 96.2% | 96.6% |
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.72 | 60.0 | 5.00e-01 | 89.7% | 93.9% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.72 | 62.0 | 5.76e-01 | 96.2% | 100.0% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.72 | 60.0 | 5.63e-01 | 92.3% | 95.9% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.72 | 63.0 | 6.02e-01 | 96.2% | 95.6% |
| 2j5uA03 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.72 | 52.0 | 5.25e-01 | 76.9% | 92.5% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 62.0 | 3.86e-01 | 97.4% | 17.8% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 55.0 | 5.25e-01 | 83.3% | 85.9% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.71 | 59.0 | 5.55e-01 | 92.3% | 95.9% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 54.0 | 5.10e-01 | 83.3% | 88.3% |
| 2v3mA00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.70 | 61.0 | 5.80e-01 | 98.7% | 87.2% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 54.0 | 4.91e-01 | 84.6% | 82.2% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.69 | 61.0 | 6.03e-01 | 98.7% | 94.0% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 59.0 | 5.51e-01 | 96.2% | 93.9% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 54.0 | 4.80e-01 | 84.6% | 81.7% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 52.0 | 4.82e-01 | 83.3% | 80.6% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 56.0 | 5.42e-01 | 93.6% | 95.6% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.67 | 59.0 | 5.71e-01 | 98.7% | 95.5% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.66 | 52.0 | 5.33e-01 | 84.6% | 100.0% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 55.0 | 5.41e-01 | 94.9% | 100.0% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 56.0 | 4.88e-01 | 97.4% | 93.4% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 56.0 | 4.49e-01 | 97.4% | 87.3% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.65 | 56.0 | 5.57e-01 | 100.0% | 95.0% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.64 | 48.0 | 4.58e-01 | 79.5% | 81.3% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 50.0 | 4.87e-01 | 85.9% | 80.5% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 51.0 | 4.63e-01 | 88.5% | 65.1% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 49.0 | 4.34e-01 | 88.5% | 61.0% |
| 4xotA03 | 2.40.30.250 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 51.0 | 4.98e-01 | 94.9% | 88.4% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 49.0 | 4.77e-01 | 93.6% | 98.9% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.60 | 49.0 | 4.70e-01 | 98.7% | 78.0% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 4.29e-01 | 100.0% | 94.7% |
| 2g3mA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 41.0 | 3.95e-01 | 88.5% | 66.3% |
| 1a3qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 4.43e-01 | 94.9% | 89.8% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 4.28e-01 | 88.5% | 78.3% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 4.49e-01 | 88.5% | 91.3% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 4.25e-01 | 92.3% | 78.1% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.54 | 43.0 | 3.53e-01 | 92.3% | 61.1% |
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.08e-01 | 91.0% | 85.3% |
| 4jzjC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.96e-01 | 92.3% | 85.7% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.13e-01 | 94.9% | 85.4% |
| 1r0aH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.77e-01 | 92.3% | 86.2% |
| 3uh8A00 | 2.60.40.3350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.80e-01 | 93.6% | 81.4% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.52 | 44.0 | 3.71e-01 | 97.4% | 95.0% |
| 5hbaA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.70e-01 | 96.2% | 96.2% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.38e-01 | 94.9% | 49.1% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.81e-01 | 97.4% | 96.7% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.94 | 82.0 | 8.43e-01 | 91.0% | 100.0% |
| 5056460 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 79.0 | 8.14e-01 | 94.9% | 94.7% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.90 | 81.0 | 7.50e-01 | 94.9% | 88.4% |
| 1954233 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.89 | 83.0 | 7.88e-01 | 97.4% | 100.0% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.87 | 79.0 | 8.13e-01 | 96.2% | 100.0% |
| 5078309 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.87 | 77.0 | 7.70e-01 | 93.6% | 100.0% |
| 1714452 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.87 | 79.0 | 7.62e-01 | 97.4% | 100.0% |
| 3513769 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.85 | 77.0 | 7.85e-01 | 94.9% | 98.7% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 70.0 | 7.33e-01 | 96.2% | 100.0% |
| 3964292 | 1.1.13.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 | 0.80 | 74.0 | 6.49e-01 | 98.7% | 71.8% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.80 | 74.0 | 7.33e-01 | 98.7% | 100.0% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.80 | 71.0 | 7.23e-01 | 94.9% | 98.7% |
| 4620059 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.78 | 67.0 | 5.84e-01 | 93.6% | 79.1% |
| 4880414 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 63.0 | 6.60e-01 | 93.6% | 98.6% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 65.0 | 6.65e-01 | 96.2% | 96.0% |
| 5081809 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 59.0 | 6.36e-01 | 91.0% | 100.0% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 65.0 | 6.24e-01 | 100.0% | 81.1% |
| 4949065 | 1.1.7.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO | 0.76 | 61.0 | 5.31e-01 | 85.9% | 76.3% |
| 4994399 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.75 | 64.0 | 6.00e-01 | 92.3% | 95.8% |
| 3542635 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.75 | 65.0 | 5.40e-01 | 94.9% | 68.1% |
| 4027927 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.75 | 67.0 | 6.23e-01 | 97.4% | 95.8% |
| 4188663 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.75 | 68.0 | 6.34e-01 | 100.0% | 92.6% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.75 | 58.0 | 5.29e-01 | 82.1% | 81.0% |
| 4474384 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.75 | 66.0 | 4.74e-01 | 98.7% | 95.6% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 66.0 | 6.56e-01 | 100.0% | 95.0% |
| 3801941 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.74 | 59.0 | 5.19e-01 | 85.9% | 91.3% |
| 4055193 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.74 | 67.0 | 6.28e-01 | 98.7% | 90.5% |
| 3642150 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 61.0 | 5.74e-01 | 91.0% | 73.7% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 63.0 | 6.39e-01 | 96.2% | 96.0% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 66.0 | 5.98e-01 | 98.7% | 76.2% |
| 4072878 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 66.0 | 6.57e-01 | 98.7% | 100.0% |
| 2320864 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.74 | 65.0 | 6.37e-01 | 96.2% | 92.8% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 65.0 | 6.31e-01 | 98.7% | 89.4% |
| 4080130 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 62.0 | 6.34e-01 | 92.3% | 96.0% |
| 4197746 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 64.0 | 6.26e-01 | 100.0% | 88.2% |
| 4854958 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 62.0 | 5.84e-01 | 100.0% | 76.0% |
| 4245518 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 61.0 | 6.20e-01 | 94.9% | 94.7% |
| 3930882 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 62.0 | 5.86e-01 | 93.6% | 96.8% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 63.0 | 6.46e-01 | 96.2% | 100.0% |
| 4989950 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 63.0 | 5.53e-01 | 94.9% | 100.0% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 66.0 | 6.41e-01 | 100.0% | 95.3% |
| 5069810 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.73 | 57.0 | 5.67e-01 | 83.3% | 88.7% |
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 62.0 | 6.29e-01 | 93.6% | 97.3% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 63.0 | 6.45e-01 | 96.2% | 100.0% |
| 5051090 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 64.0 | 6.42e-01 | 100.0% | 96.2% |
| 4521518 | 1.1.7.121 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 | 0.72 | 64.0 | 5.62e-01 | 98.7% | 79.1% |
| 161224 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.72 | 56.0 | 5.14e-01 | 83.3% | 79.0% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.72 | 60.0 | 5.43e-01 | 92.3% | 97.1% |
| 3987212 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.71 | 59.0 | 5.39e-01 | 92.3% | 94.3% |
| 4460819 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.71 | 63.0 | 5.77e-01 | 97.4% | 88.0% |
| 3904189 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 63.0 | 5.84e-01 | 100.0% | 79.0% |
| 3387535 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.71 | 59.0 | 4.49e-01 | 93.6% | 100.0% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 61.0 | 6.22e-01 | 97.4% | 100.0% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 63.0 | 6.27e-01 | 100.0% | 97.5% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 61.0 | 6.10e-01 | 98.7% | 95.0% |
| 5035997 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 57.0 | 5.93e-01 | 93.6% | 100.0% |
| 163768 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.69 | 61.0 | 6.00e-01 | 98.7% | 92.9% |
| 3618300 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 61.0 | 5.21e-01 | 100.0% | 88.5% |
| 4932427 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.69 | 53.0 | 5.07e-01 | 82.1% | 90.0% |
| 3402635 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.69 | 61.0 | 5.10e-01 | 100.0% | 93.3% |
| 5035362 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 56.0 | 5.37e-01 | 91.0% | 96.7% |
| 4353877 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.67 | 59.0 | 5.59e-01 | 100.0% | 93.7% |
| 4064427 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 55.0 | 5.28e-01 | 92.3% | 96.7% |
| 3395467 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 57.0 | 5.16e-01 | 97.4% | 100.0% |
| 5046975 | 1.1.7.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C | 0.67 | 57.0 | 5.72e-01 | 97.4% | 95.0% |
| 3845835 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.66 | 58.0 | 5.26e-01 | 100.0% | 77.3% |
| 4347919 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.66 | 58.0 | 5.58e-01 | 100.0% | 93.3% |
| 4270536 | 1.1.7.96 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FIST_C | 0.64 | 55.0 | 5.13e-01 | 98.7% | 100.0% |
| 3264420 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.63 | 52.0 | 5.16e-01 | 92.3% | 93.8% |
| 3976133 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 54.0 | 5.14e-01 | 98.7% | 90.5% |
| 4599558 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 49.0 | 4.71e-01 | 88.5% | 100.0% |
| 1005556 | 10.2.1.65 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel | 0.59 | 48.0 | 4.66e-01 | 93.6% | 97.7% |
| 5048248 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 46.0 | 4.48e-01 | 88.5% | 98.8% |
| 4015071 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.80e-01 | 87.2% | 98.6% |
| 3740336 | 12.1.1.93 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › PF26108 | 0.56 | 47.0 | 3.97e-01 | 94.9% | 64.3% |
| 3864111 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.56 | 47.0 | 4.02e-01 | 100.0% | 60.7% |
| 3933470 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.56 | 45.0 | 3.43e-01 | 94.9% | 41.4% |
| 3271989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 4.20e-01 | 88.5% | 78.9% |
| 3924218 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 45.0 | 4.09e-01 | 97.4% | 65.2% |
| 3230128 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 44.0 | 3.32e-01 | 93.6% | 33.2% |
| 3592720 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 40.0 | 2.73e-01 | 82.1% | 22.5% |
| 3249778 | 11.1.1.914 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29344 | 0.53 | 43.0 | 4.16e-01 | 93.6% | 100.0% |
| 3301465 | 12.5.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › DUF1191 | 0.52 | 32.0 | 2.47e-01 | 100.0% | 26.3% |
| 4945485 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 4.03e-01 | 93.6% | 88.4% |
| 3342496 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.52 | 45.0 | 2.73e-01 | 97.4% | 16.3% |
| 3377738 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 37.0 | 3.01e-01 | 82.1% | 43.4% |
D5
medium
residues 297-496
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00067__D47-97_678-808_825-859
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gs8A01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.60 | 38.0 | 3.30e-01 | 82.0% | 41.6% |
| 2czdB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 33.0 | 3.35e-01 | 87.5% | 56.0% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 36.0 | 2.76e-01 | 82.0% | 27.3% |
| 5iz4A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 40.0 | 3.76e-01 | 77.5% | 68.8% |
| 1tyyA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 35.0 | 3.11e-01 | 81.0% | 46.1% |
| 6e0bA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.48e-01 | 88.5% | 54.1% |
| 2ag5C00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 39.0 | 3.65e-01 | 79.5% | 73.8% |
| 2nwqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 38.0 | 3.70e-01 | 79.5% | 71.1% |
| 4z0tA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 40.0 | 3.72e-01 | 82.5% | 70.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4882286 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.91 | 67.0 | 7.77e-01 | 82.5% | 100.0% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.88 | 71.0 | 6.20e-01 | 84.5% | 60.0% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.87 | 73.0 | 6.58e-01 | 85.5% | 67.5% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.86 | 80.0 | 7.03e-01 | 97.0% | 100.0% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.85 | 70.0 | 6.12e-01 | 84.5% | 62.5% |
| 4043614 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.65 | 39.0 | 3.86e-01 | 88.0% | 54.6% |
| 5052350 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 36.0 | 3.67e-01 | 82.0% | 63.5% |
| 3592793 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 43.0 | 4.24e-01 | 81.0% | 94.8% |
| 5051584 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.54 | 40.0 | 3.80e-01 | 88.5% | 64.2% |
| 1492343 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 28.0 | 2.90e-01 | 82.5% | 50.5% |
| 4252994 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.53 | 40.0 | 3.67e-01 | 77.5% | 70.8% |
| 5068117 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 32.0 | 3.32e-01 | 92.0% | 60.0% |
| 4421877 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.53 | 40.0 | 3.64e-01 | 77.5% | 70.9% |
| 4019761 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 42.0 | 3.54e-01 | 84.5% | 71.5% |
| 4376130 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 40.0 | 3.74e-01 | 79.5% | 70.7% |
| 4019845 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.51 | 41.0 | 3.44e-01 | 83.5% | 70.6% |
| 4309079 | 2003.1.1.61 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR | 0.51 | 38.0 | 3.39e-01 | 77.0% | 66.9% |
| 3988728 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 40.0 | 3.32e-01 | 82.0% | 58.3% |
| 3727642 | 2003.1.1.148 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short, KR | 0.50 | 41.0 | 3.57e-01 | 87.0% | 67.4% |