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NC_048687.1__YP_009836235.1__HWB42_gp54__00054

Bact-Vir

NC_048687.1__YP_009836235.1__HWB42_gp54__00054

Identity

Accession:
NC_048687 ↗
Kingdom:
phage

Quality

77.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-59
PDB
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 4.57e-01 70.6% 61.4%
2jgpA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.77 69.0 4.37e-01 98.0% 37.8%
1y1aA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.71 59.0 4.88e-01 96.1% 99.0%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.71 63.0 4.27e-01 100.0% 40.3%
7y7oA01 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.69 56.0 4.11e-01 92.2% 69.2%
4ae4A00 1.20.120.1920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain 0.69 55.0 4.32e-01 90.2% 43.0%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.68 52.0 3.99e-01 84.3% 94.1%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 44.0 3.02e-01 70.6% 92.4%
6cnzF00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.65 54.0 3.90e-01 96.1% 74.7%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 3.52e-01 72.5% 45.9%
1f5qB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 51.0 4.16e-01 96.1% 53.2%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.63 52.0 4.66e-01 96.1% 100.0%
4qdnA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.63 52.0 4.15e-01 100.0% 67.8%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.63 50.0 4.40e-01 90.2% 65.8%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.55e-01 76.5% 95.7%
3djbA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.61 47.0 3.84e-01 84.3% 57.3%
4cxfA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.61 47.0 4.14e-01 94.1% 73.6%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.60 45.0 3.30e-01 90.2% 26.5%
3vxgA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.60 53.0 3.19e-01 98.0% 16.4%
1v92A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.60 44.0 4.57e-01 88.2% 91.3%
3p0uA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.57 44.0 3.13e-01 100.0% 48.6%
7osfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 2.92e-01 86.3% 27.8%
3vr4B04 1.10.1140.10 Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 0.56 47.0 3.43e-01 96.1% 60.9%
1tviA00 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.55 45.0 3.40e-01 100.0% 68.7%
1nxuA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.55 45.0 4.00e-01 96.1% 69.6%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058428 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.89 62.0 6.04e-01 78.4% 67.3%
4984124 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 63.0 5.82e-01 92.2% 70.8%
4953886 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.68 55.0 5.06e-01 94.1% 77.1%
4446473 311.1.1.1 a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 0.67 51.0 3.77e-01 86.3% 61.4%
4641949 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.65 53.0 5.39e-01 90.2% 92.0%
4115978 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.64 53.0 4.88e-01 90.2% 87.7%
4201756 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 52.0 5.11e-01 90.2% 98.2%
4983738 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.64 53.0 4.39e-01 94.1% 57.9%
4276160 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.64 54.0 4.01e-01 98.0% 69.8%
4501680 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.63 52.0 3.89e-01 96.1% 65.7%
5074875 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.63 49.0 4.24e-01 92.2% 63.3%
4532886 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.63 55.0 3.94e-01 100.0% 92.3%
4285687 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.63 53.0 4.00e-01 98.0% 71.9%
5001059 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.62 50.0 4.46e-01 94.1% 67.5%
4956905 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.62 52.0 4.56e-01 96.1% 67.5%
4169229 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.62 53.0 3.71e-01 100.0% 60.6%
4648382 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.62 53.0 3.86e-01 98.0% 67.6%
4585171 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.62 48.0 4.70e-01 86.3% 87.3%
4940761 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.60 48.0 4.33e-01 88.2% 77.1%
3428162 103.1.1.22 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl 0.59 49.0 4.84e-01 96.1% 89.1%
4679579 2498.1.1.22 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.59 50.0 3.67e-01 96.1% 68.3%
5082367 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.59 45.0 4.28e-01 90.2% 89.2%
3193503 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 50.0 4.10e-01 98.0% 81.0%
3603904 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.57 43.0 3.79e-01 92.2% 65.6%
4955004 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.57 45.0 4.39e-01 96.1% 95.0%
3979669 207.8.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.55 42.0 2.53e-01 84.3% 49.6%
4959355 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 41.0 2.64e-01 80.4% 33.7%
4397033 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.54 43.0 4.22e-01 96.1% 100.0%
4642449 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.54 42.0 4.31e-01 94.1% 84.0%
4934254 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.52 40.0 2.99e-01 92.2% 30.9%
D2 high residues 62-109
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 70.0 5.54e-01 85.4% 55.4%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 69.0 5.79e-01 85.4% 55.1%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 76.0 6.77e-01 97.9% 71.6%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 70.0 4.93e-01 89.6% 39.6%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.85 75.0 5.47e-01 100.0% 38.1%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 64.0 5.79e-01 87.5% 68.7%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.95e-01 89.6% 66.7%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.01e-01 83.3% 48.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 4.86e-01 97.9% 52.7%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 4.55e-01 89.6% 32.2%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 5.00e-01 81.2% 65.0%
3h5aD01 3.90.930.70 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.79 69.0 5.63e-01 97.9% 67.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.43e-01 91.7% 56.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 5.55e-01 85.4% 66.7%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.30e-01 87.5% 66.7%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.46e-01 85.4% 69.8%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.76 57.0 4.19e-01 83.3% 31.3%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.65e-01 91.7% 77.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 6.06e-01 91.7% 88.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 5.42e-01 79.2% 80.0%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 62.0 6.22e-01 97.9% 95.8%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.75 63.0 5.76e-01 100.0% 72.1%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.23e-01 97.9% 55.2%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.74 59.0 3.85e-01 89.6% 22.9%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.03e-01 91.7% 55.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 4.80e-01 83.3% 55.6%
2fq3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.06e-01 100.0% 64.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.48e-01 83.3% 46.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.77e-01 85.4% 54.7%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.03e-01 91.7% 70.7%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 52.0 5.45e-01 85.4% 95.1%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 56.0 5.75e-01 100.0% 97.8%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.70 58.0 4.70e-01 97.9% 48.5%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.75e-01 83.3% 63.1%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.69 54.0 5.22e-01 89.6% 76.8%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.69 49.0 3.45e-01 93.8% 23.4%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 52.0 5.35e-01 87.5% 89.1%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 4.90e-01 85.4% 70.7%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 51.0 5.34e-01 81.2% 95.1%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 45.0 4.84e-01 79.2% 97.1%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 52.0 4.86e-01 87.5% 73.8%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 51.0 5.07e-01 89.6% 82.4%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 55.0 5.38e-01 100.0% 100.0%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.00e-01 95.8% 81.5%
3q1pA01 6.10.250.1120 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 48.0 5.19e-01 93.8% 100.0%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.22e-01 91.7% 51.7%
2hinA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 43.0 3.97e-01 72.9% 53.0%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 54.0 4.27e-01 97.9% 80.4%
5aj3N01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 51.0 4.16e-01 93.8% 65.9%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 49.0 4.29e-01 97.9% 58.5%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 49.0 4.90e-01 95.8% 93.9%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 52.0 4.11e-01 97.9% 87.8%
4nphA02 1.20.1270.330 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.59 48.0 4.34e-01 100.0% 67.6%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.65e-01 97.9% 50.7%
1fadA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 38.0 3.10e-01 81.2% 46.3%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963361 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.91 72.0 6.26e-01 85.4% 64.3%
5044589 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 74.0 6.59e-01 91.7% 67.7%
5038647 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 69.0 6.07e-01 89.6% 60.0%
4928064 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 69.0 6.16e-01 89.6% 69.1%
4929958 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.85 67.0 4.98e-01 87.5% 38.7%
4948834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 6.64e-01 81.2% 97.7%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 66.0 5.52e-01 85.4% 52.5%
3385441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 71.0 6.13e-01 95.8% 66.7%
5078641 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.84 74.0 6.27e-01 100.0% 65.8%
4939633 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.83 64.0 5.92e-01 85.4% 66.7%
5060563 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.83 73.0 6.44e-01 100.0% 68.6%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.83 63.0 5.19e-01 83.3% 48.2%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.82 72.0 6.11e-01 100.0% 60.0%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 65.0 6.08e-01 89.6% 70.0%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.81 71.0 5.52e-01 100.0% 45.7%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 6.16e-01 91.7% 73.3%
4998375 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 5.46e-01 91.7% 51.8%
4961792 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.76e-01 100.0% 56.5%
5025805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 59.0 5.75e-01 83.3% 74.5%
4941224 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 64.0 5.45e-01 91.7% 55.0%
5074931 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 67.0 5.55e-01 100.0% 56.7%
3959738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 59.0 4.77e-01 83.3% 43.2%
4624269 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 6.22e-01 97.9% 93.3%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 59.0 5.00e-01 83.3% 51.2%
4929413 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 63.0 5.19e-01 89.6% 51.8%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 62.0 6.00e-01 91.7% 80.0%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.77 64.0 6.42e-01 100.0% 92.0%
3619451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 59.0 5.42e-01 85.4% 72.3%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.77 63.0 6.06e-01 93.8% 80.0%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.77 63.0 5.05e-01 93.8% 46.3%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 5.72e-01 93.8% 71.7%
4985590 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 56.0 5.95e-01 81.2% 97.5%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 62.0 6.19e-01 97.9% 94.0%
3505559 101.1.6.19 alpha arrays › HTH › HTH › TrpR › PAX 0.75 62.0 5.39e-01 95.8% 60.0%
3289370 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.75 59.0 4.74e-01 91.7% 43.0%
4642479 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 60.0 4.88e-01 91.7% 46.3%
5080109 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.75 59.0 5.17e-01 91.7% 57.3%
4282037 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 59.0 4.87e-01 89.6% 48.9%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.75 65.0 4.05e-01 100.0% 18.3%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 58.0 5.62e-01 87.5% 76.4%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.75 61.0 6.11e-01 95.8% 92.0%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.75 64.0 4.84e-01 100.0% 40.8%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 59.0 4.70e-01 91.7% 43.0%
3961692 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.74 59.0 4.78e-01 89.6% 45.3%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 5.57e-01 95.8% 69.2%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.74 59.0 4.75e-01 91.7% 45.0%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.74 57.0 5.41e-01 89.6% 70.0%
3968886 101.1.1.77 alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 0.74 64.0 5.88e-01 100.0% 78.5%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 56.0 5.89e-01 85.4% 100.0%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.74 59.0 4.87e-01 91.7% 48.9%
4934146 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 55.0 4.93e-01 83.3% 57.1%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.73 60.0 4.97e-01 95.8% 52.2%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 62.0 5.03e-01 100.0% 51.6%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.72 52.0 5.54e-01 81.2% 100.0%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 4.80e-01 85.4% 54.7%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.72 57.0 4.67e-01 91.7% 50.5%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 54.0 4.78e-01 85.4% 54.7%
1738401 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.72 52.0 5.47e-01 81.2% 92.7%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.72 53.0 5.63e-01 83.3% 100.0%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.72 60.0 5.30e-01 100.0% 64.0%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.72 58.0 5.15e-01 93.8% 62.9%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.71 59.0 5.77e-01 100.0% 89.1%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.01e-01 93.8% 61.4%
3280379 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 54.0 4.41e-01 91.7% 42.0%
3502247 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.71 56.0 5.31e-01 93.8% 73.3%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.71 56.0 5.30e-01 91.7% 78.3%
3944389 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 56.0 4.78e-01 91.7% 58.8%
4395941 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.70 48.0 5.26e-01 72.9% 100.0%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 56.0 5.75e-01 100.0% 100.0%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.40e-01 97.9% 78.5%
4391758 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.70 59.0 4.86e-01 100.0% 52.6%
3660305 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.70 56.0 5.55e-01 93.8% 94.0%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.22e-01 93.8% 69.2%
4010144 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.70 57.0 5.54e-01 95.8% 85.5%
4955713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 4.95e-01 91.7% 66.2%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 55.0 5.46e-01 95.8% 90.0%
5013090 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.69 52.0 3.55e-01 85.4% 23.9%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 5.55e-01 100.0% 98.2%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.68 51.0 5.36e-01 93.8% 100.0%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.66 49.0 4.68e-01 85.4% 68.3%
3394867 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.66 52.0 4.63e-01 93.8% 61.3%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.66 49.0 4.88e-01 85.4% 82.0%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 52.0 5.19e-01 95.8% 88.0%
1149746 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.66 51.0 5.11e-01 87.5% 87.5%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 48.0 4.95e-01 89.6% 91.1%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.65 48.0 4.94e-01 89.6% 91.1%
3541244 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.65 54.0 4.99e-01 97.9% 92.3%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.64 50.0 4.61e-01 93.8% 66.2%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.64 54.0 5.26e-01 100.0% 89.1%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.63 51.0 4.85e-01 100.0% 81.7%
3737869 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 55.0 3.33e-01 100.0% 27.7%
3590546 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.61 49.0 4.79e-01 100.0% 85.2%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 45.0 4.36e-01 91.7% 78.3%