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NC_048687.1__YP_009836240.1__HWB42_gp59__00059
Bact-VirNC_048687.1__YP_009836240.1__HWB42_gp59__00059
Identity
- Accession:
- NC_048687 ↗
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Taxonomy
TaxID: 2059855
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-117
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 45.0 | 4.74e-01 | 99.1% | 62.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 39.0 | 4.76e-01 | 70.9% | 80.0% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 40.0 | 4.42e-01 | 98.3% | 71.3% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.68 | 45.0 | 4.39e-01 | 95.7% | 60.3% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 38.0 | 4.58e-01 | 72.6% | 90.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 31.0 | 3.74e-01 | 76.9% | 70.9% |
| 5dqqA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 32.0 | 3.09e-01 | 96.6% | 46.2% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 35.0 | 3.59e-01 | 94.9% | 65.2% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.51 | 34.0 | 3.22e-01 | 98.3% | 54.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5025805 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 36.0 | 5.12e-01 | 90.6% | 94.5% |
| 3578154 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 53.0 | 5.96e-01 | 88.0% | 95.6% |
| 3283074 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 43.0 | 5.00e-01 | 89.7% | 80.0% |
| 3978496 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.73 | 38.0 | 4.83e-01 | 86.3% | 84.3% |
| 3289370 | 101.1.1.300 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 | 0.67 | 42.0 | 4.51e-01 | 84.6% | 74.0% |
| 4588620 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.66 | 39.0 | 4.36e-01 | 88.9% | 75.6% |
| 3982095 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.66 | 42.0 | 4.59e-01 | 86.3% | 77.6% |
| 4260337 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.61 | 37.0 | 4.12e-01 | 86.3% | 74.7% |
| 4936976 | 633.10.1.2 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Bbp7-like | 0.54 | 33.0 | 3.53e-01 | 94.9% | 67.6% |
| 4020066 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.52 | 44.0 | 3.23e-01 | 92.3% | 82.0% |
| 5052012 | 604.39.1.16 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ThiW | 0.52 | 39.0 | 3.42e-01 | 78.6% | 74.4% |
| 4063100 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.51 | 26.0 | 3.08e-01 | 76.1% | 68.8% |
| 3316910 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.50 | 34.0 | 3.10e-01 | 98.3% | 51.0% |