Back to structures

NC_048706.1__YP_009838112.1__HWB61_gp25__00055

Bact-Vir

NC_048706.1__YP_009838112.1__HWB61_gp25__00055

Identity

Accession:
NC_048706 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-183
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 34.0 4.52e-01 74.7% 92.6%
2dliA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 34.0 4.46e-01 76.9% 89.8%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.66 33.0 4.51e-01 81.9% 95.6%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 37.0 4.54e-01 76.9% 88.4%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.62 37.0 4.54e-01 84.1% 92.2%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.62 36.0 4.24e-01 83.0% 81.7%
4of0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 40.0 4.73e-01 83.0% 96.0%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 33.0 4.25e-01 76.4% 92.2%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 4.60e-01 72.0% 98.7%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.59 42.0 4.83e-01 84.6% 100.0%
1r0aH01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 37.0 4.45e-01 77.5% 93.5%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 25.0 3.41e-01 70.3% 74.5%
8begA03 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 4.60e-01 73.1% 100.0%
2blfA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 33.0 3.98e-01 77.5% 90.4%
4kh9A03 2.60.120.1370 Mainly Beta › Sandwich › Jelly Rolls › 0.56 35.0 4.27e-01 83.0% 99.1%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 28.0 3.79e-01 83.5% 100.0%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 28.0 3.21e-01 84.6% 63.0%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.54 35.0 4.00e-01 84.6% 86.0%
2hevF00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 36.0 4.18e-01 84.1% 96.8%
1w8oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 30.0 3.92e-01 74.7% 98.0%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 4.52e-01 87.4% 100.0%
4a42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 36.0 4.30e-01 80.2% 100.0%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.53 34.0 4.14e-01 81.9% 100.0%
1g0dA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.96e-01 83.0% 89.1%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 35.0 3.98e-01 83.0% 91.7%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.52 34.0 4.02e-01 84.1% 97.5%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 28.0 3.64e-01 72.0% 93.1%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.52 31.0 3.80e-01 73.1% 93.0%
1upsB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 3.34e-01 75.3% 95.1%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.72e-01 85.7% 70.2%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 3.68e-01 70.3% 91.1%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 34.0 3.87e-01 82.4% 90.6%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 33.0 3.85e-01 81.3% 92.3%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.65e-01 83.0% 74.8%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.66e-01 83.0% 73.2%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.50 36.0 3.91e-01 89.6% 89.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3287344 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.80 66.0 7.11e-01 100.0% 100.0%
4559658 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.79 72.0 6.95e-01 95.1% 100.0%
3279144 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.75 67.0 6.95e-01 93.4% 100.0%
3547717 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.68 37.0 4.74e-01 82.4% 90.5%
4959958 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.67 38.0 4.86e-01 83.0% 93.6%
3881457 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 40.0 4.75e-01 77.5% 90.4%
4971476 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.63 44.0 3.51e-01 86.8% 36.4%
3528111 10.21.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.62 38.0 4.55e-01 83.0% 88.0%
3621318 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 32.0 4.28e-01 78.6% 93.7%
5047113 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 37.0 4.65e-01 83.0% 95.7%
3796900 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 35.0 4.24e-01 83.0% 84.9%
3882689 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.61 40.0 4.38e-01 81.3% 80.7%
5046630 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 36.0 4.44e-01 83.5% 93.0%
3342352 10.32.1.210 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.60 35.0 4.31e-01 83.0% 92.7%
4954879 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 37.0 4.38e-01 75.3% 91.7%
4191287 10.1.1.46 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › InhA-like_MAM 0.59 40.0 4.23e-01 85.7% 76.9%
5005599 10.1.2.201 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 0.59 30.0 3.98e-01 78.6% 94.4%
4202051 10.32.1.271 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 0.59 30.0 3.98e-01 78.6% 94.4%
4979173 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 33.0 4.20e-01 73.1% 95.2%
3367643 11.1.1.635 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_N_CWD1 0.58 39.0 4.33e-01 80.8% 84.8%
3753929 11.1.1.290 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASTN1_2_fn3 0.58 37.0 3.95e-01 76.4% 73.5%
5038687 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 32.0 4.07e-01 83.5% 96.0%
3936514 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 3.92e-01 77.5% 68.3%
5062163 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.57 39.0 4.54e-01 81.9% 96.9%
4948691 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 31.0 4.04e-01 73.6% 96.0%
4963992 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 4.41e-01 72.0% 94.1%
5040182 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 33.0 4.04e-01 72.5% 94.5%
5007278 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 38.0 4.48e-01 72.0% 98.5%
4955989 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 31.0 3.99e-01 83.5% 100.0%
3403487 10.4.1.6 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › TEP1_CUB2 0.55 33.0 3.98e-01 73.6% 91.3%
5041322 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 31.0 3.95e-01 70.3% 96.2%
3566761 10.32.1.230 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.54 31.0 3.93e-01 89.0% 97.1%
4232261 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 38.0 3.95e-01 71.4% 90.9%
3927221 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.53 33.0 3.93e-01 83.5% 92.5%
3937082 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.53 32.0 3.88e-01 73.1% 93.9%
4619601 10.32.1.48 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 0.52 34.0 4.03e-01 81.3% 96.0%
4223138 10.32.1.22 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CFA20_dom 0.52 36.0 3.52e-01 70.3% 85.4%
3266116 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.71e-01 76.4% 85.2%
4567712 10.32.1.48 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 0.51 34.0 4.04e-01 81.9% 98.4%
4002865 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.51 35.0 3.96e-01 82.4% 92.1%
5041180 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 32.0 3.67e-01 74.2% 87.7%