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NC_048718.1__YP_009838939.1__HWB74_gp36__00036
Bact-VirNC_048718.1__YP_009838939.1__HWB74_gp36__00036
Identity
- Accession:
- NC_048718 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Taxonomy
TaxID: 2249767
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 182-303
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00183__D36-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00717.29 best | Peptidase_S24 | 53.4 | 2.70e-14 | 95.9% | 97.4% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.88 | 81.0 | 8.24e-01 | 96.7% | 97.5% |
| 1ay9A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.86 | 66.0 | 7.07e-01 | 80.3% | 89.8% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.86 | 63.0 | 6.92e-01 | 75.4% | 93.1% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.82 | 78.0 | 7.80e-01 | 100.0% | 97.6% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 39.0 | 4.82e-01 | 96.7% | 100.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 30.0 | 4.22e-01 | 70.5% | 100.0% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 34.0 | 4.42e-01 | 97.5% | 96.9% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 38.0 | 4.66e-01 | 97.5% | 100.0% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.62 | 31.0 | 4.29e-01 | 74.6% | 100.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 39.0 | 4.27e-01 | 98.4% | 77.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 31.0 | 4.04e-01 | 89.3% | 87.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.32e-01 | 91.8% | 94.1% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 24.0 | 2.78e-01 | 82.0% | 56.8% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 31.0 | 3.39e-01 | 87.7% | 74.7% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4075150 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.91 | 71.0 | 5.88e-01 | 80.3% | 50.3% |
| 4447540 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.91 | 86.0 | 8.00e-01 | 100.0% | 82.8% |
| 4493478 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.90 | 86.0 | 8.45e-01 | 100.0% | 93.8% |
| 4071971 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.90 | 84.0 | 7.86e-01 | 100.0% | 82.1% |
| 3973676 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.89 | 85.0 | 8.53e-01 | 100.0% | 97.6% |
| 4607208 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.89 | 82.0 | 8.24e-01 | 100.0% | 95.1% |
| 4331428 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.88 | 85.0 | 8.00e-01 | 100.0% | 87.9% |
| 4036705 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.88 | 83.0 | 7.99e-01 | 100.0% | 88.9% |
| 3945057 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.87 | 67.0 | 6.67e-01 | 80.3% | 76.8% |
| 4406602 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.86 | 82.0 | 7.83e-01 | 100.0% | 92.8% |
| 3965029 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.85 | 81.0 | 7.68e-01 | 100.0% | 92.1% |
| 4259069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 66.0 | 5.42e-01 | 79.5% | 61.5% |
| 5065747 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.83 | 59.0 | 6.86e-01 | 75.4% | 98.9% |
| 4034335 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.83 | 71.0 | 7.54e-01 | 95.1% | 100.0% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.81 | 77.0 | 7.38e-01 | 100.0% | 91.9% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.81 | 57.0 | 5.99e-01 | 73.8% | 80.0% |
| 4646593 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.80 | 76.0 | 7.34e-01 | 100.0% | 92.6% |
| 3290509 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.79 | 56.0 | 6.41e-01 | 90.2% | 97.8% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.78 | 53.0 | 5.79e-01 | 72.1% | 84.0% |
| 4943011 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 57.0 | 6.41e-01 | 89.3% | 97.9% |
| 3164898 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.76 | 57.0 | 6.42e-01 | 77.9% | 100.0% |
| 4999430 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.76 | 59.0 | 6.02e-01 | 93.4% | 82.5% |
| 5054196 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.75 | 60.0 | 5.54e-01 | 83.6% | 86.7% |
| 5057900 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.74 | 60.0 | 5.67e-01 | 85.2% | 89.7% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.73 | 59.0 | 5.38e-01 | 83.6% | 71.0% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.71 | 57.0 | 5.19e-01 | 82.8% | 69.7% |
| 4937121 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.71 | 57.0 | 5.91e-01 | 83.6% | 91.3% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.70 | 60.0 | 5.74e-01 | 90.2% | 96.4% |
| 3622055 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 40.0 | 4.66e-01 | 97.5% | 85.9% |
| 3877478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 41.0 | 4.44e-01 | 97.5% | 77.0% |
| 3936430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 40.0 | 4.71e-01 | 97.5% | 93.8% |
| 3558926 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 41.0 | 4.63e-01 | 97.5% | 86.7% |
| 3407820 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 39.0 | 4.48e-01 | 98.4% | 87.1% |
| 3393297 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 39.0 | 4.62e-01 | 98.4% | 93.8% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 39.0 | 4.56e-01 | 97.5% | 89.4% |
| 4055256 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 40.0 | 4.57e-01 | 98.4% | 87.8% |
| 3247995 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.61 | 34.0 | 4.34e-01 | 73.8% | 94.3% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.60 | 35.0 | 3.80e-01 | 76.2% | 69.0% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 39.0 | 4.23e-01 | 98.4% | 80.0% |
| 3964422 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 45.0 | 4.13e-01 | 79.5% | 70.6% |
D2
medium
residues 5-177
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01381.29 best | HTH_3 | 38.8 | 1.10e-09 | 33.0% | 81.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 29.0 | 4.73e-01 | 98.3% | 95.7% |
| 2wzkA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 32.0 | 3.70e-01 | 100.0% | 74.8% |
| 2wiyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 40.0 | 3.11e-01 | 76.3% | 75.9% |
| 3nf2A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 41.0 | 3.28e-01 | 86.7% | 58.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.85 | 29.0 | 5.55e-01 | 100.0% | 100.0% | |
| 3985012 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.75 | 32.0 | 4.97e-01 | 83.8% | 94.7% |
| 1510513 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.65 | 33.0 | 4.16e-01 | 86.7% | 79.4% |
| 4954379 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 35.0 | 4.37e-01 | 87.9% | 93.6% |
| 3978875 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.58 | 37.0 | 4.49e-01 | 78.0% | 94.8% |
| 3591049 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.58 | 39.0 | 4.25e-01 | 91.9% | 80.0% |
| 4941712 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.51 | 37.0 | 3.73e-01 | 75.1% | 74.1% |