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NC_048718.1__YP_009838940.1__HWB74_gp37__00037

Bact-Vir

NC_048718.1__YP_009838940.1__HWB74_gp37__00037

Identity

Accession:
NC_048718 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fernvirus› Paenibacillus_phage_Jacopo

TaxID: 2249767

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-80
PDB
Domain cluster: rep: MT880871.1__QPB07652.1__PLKLOBMN_00081__00030__D2-74
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 64.0 7.02e-01 86.1% 96.8%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 63.0 6.10e-01 92.4% 69.8%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 62.0 6.72e-01 86.1% 93.9%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 64.0 5.80e-01 88.6% 62.1%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 58.0 6.33e-01 78.5% 90.6%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 60.0 6.37e-01 88.6% 92.9%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 60.0 5.70e-01 84.8% 70.3%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 59.0 6.25e-01 88.6% 94.1%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 62.0 6.36e-01 86.1% 90.9%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 59.0 5.80e-01 86.1% 76.2%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 65.0 6.48e-01 92.4% 92.6%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 56.0 5.84e-01 83.5% 85.9%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 61.0 6.53e-01 92.4% 100.0%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 52.0 5.47e-01 81.0% 80.0%
2mezA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 54.0 4.93e-01 84.8% 57.8%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 56.0 6.03e-01 87.3% 93.9%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 6.49e-01 93.7% 97.5%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 6.10e-01 93.7% 84.6%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 57.0 6.14e-01 91.1% 98.5%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 60.0 6.14e-01 87.3% 92.1%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 6.00e-01 87.3% 88.3%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 65.0 6.18e-01 97.5% 91.4%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 61.0 5.88e-01 93.7% 80.9%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 63.0 5.95e-01 93.7% 83.9%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 54.0 5.58e-01 83.5% 86.1%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 6.18e-01 94.9% 96.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 58.0 5.56e-01 91.1% 76.7%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 58.0 5.94e-01 92.4% 93.2%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 56.0 5.32e-01 89.9% 72.5%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 57.0 5.95e-01 91.1% 97.1%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 59.0 5.87e-01 91.1% 91.5%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 37.0 4.60e-01 84.8% 95.0%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 56.0 5.71e-01 91.1% 88.2%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 5.44e-01 79.7% 90.8%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 61.0 6.00e-01 96.2% 96.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 53.0 5.47e-01 87.3% 86.8%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 5.35e-01 83.5% 100.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 53.0 5.28e-01 92.4% 87.8%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 47.0 4.85e-01 89.9% 88.2%
1hy0A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.53 43.0 3.71e-01 93.7% 69.3%
3oc2A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.52 45.0 3.54e-01 100.0% 45.1%
4egvB01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 41.0 2.76e-01 94.9% 77.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 33.0 3.86e-01 84.8% 94.6%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4084920 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.86 70.0 7.45e-01 92.4% 97.1%
2766 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 64.0 7.02e-01 86.1% 96.8%
4038777 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 63.0 5.87e-01 86.1% 65.3%
4952242 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.83 62.0 6.57e-01 86.1% 88.6%
4061717 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 63.0 5.68e-01 86.1% 60.0%
4984278 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.83 58.0 5.96e-01 78.5% 76.0%
4425759 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 61.0 5.46e-01 86.1% 56.4%
2809324 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 58.0 6.04e-01 78.5% 79.5%
3591049 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 63.0 5.00e-01 88.6% 42.7%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 58.0 6.11e-01 82.3% 83.1%
4032323 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 62.0 6.74e-01 89.9% 100.0%
3965656 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 60.0 6.01e-01 87.3% 77.5%
4159770 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 59.0 6.03e-01 86.1% 81.3%
4173793 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 63.0 6.30e-01 94.9% 83.7%
3280943 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.79 61.0 6.63e-01 88.6% 100.0%
2888862 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.79 61.0 6.54e-01 88.6% 98.5%
5015314 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 61.0 6.11e-01 92.4% 81.2%
3662968 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 57.0 6.42e-01 78.5% 100.0%
5028710 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 61.0 6.32e-01 91.1% 89.3%
1510513 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 59.0 5.33e-01 89.9% 60.7%
3967547 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 55.0 5.77e-01 82.3% 84.3%
4405096 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 62.0 6.53e-01 97.5% 98.6%
3220337 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 63.0 6.07e-01 89.9% 77.8%
5071803 101.45.1.0 ↗ alpha arrays › HTH › DNA polymerase II large subunit DP2 helical domain › DNA polymerase II large subunit DP2 helical domain 0.76 60.0 5.92e-01 91.1% 78.8%
4125247 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 62.0 6.09e-01 88.6% 81.2%
3987118 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 64.0 6.26e-01 93.7% 84.7%
5039762 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 60.0 5.61e-01 88.6% 69.5%
3624238 101.1.4.43 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3+MBF1 0.76 63.0 5.42e-01 89.9% 58.3%
2777 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 65.0 6.30e-01 92.4% 86.2%
4675105 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 60.0 5.93e-01 92.4% 80.0%
3952098 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 57.0 5.75e-01 88.6% 80.0%
4212800 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 64.0 5.77e-01 93.7% 74.1%
4536849 10.12.1.146 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.75 60.0 3.77e-01 92.4% 16.8%
2149196 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 59.0 6.27e-01 89.9% 100.0%
3965190 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 54.0 5.82e-01 77.2% 95.4%
166410 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.74 60.0 6.14e-01 87.3% 92.1%
1923620 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 58.0 5.81e-01 89.9% 81.7%
4484890 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 66.0 6.34e-01 98.7% 86.7%
4008447 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.73 55.0 5.51e-01 79.7% 81.2%
3965598 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 56.0 5.94e-01 89.9% 92.9%
4940450 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 62.0 6.41e-01 94.9% 100.0%
3604422 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 52.0 5.50e-01 86.1% 85.7%
4264146 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 53.0 5.62e-01 83.5% 91.2%
4678741 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 58.0 6.00e-01 92.4% 94.7%
4530543 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 55.0 5.76e-01 88.6% 92.9%
4502581 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 52.0 5.63e-01 83.5% 95.4%
4147763 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 53.0 5.52e-01 86.1% 90.0%
4993127 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 60.0 5.95e-01 96.2% 94.1%
4994602 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 50.0 5.58e-01 81.0% 98.3%
4022186 101.1.4.58 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 0.70 50.0 5.58e-01 77.2% 98.3%
4999897 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 58.0 6.00e-01 96.2% 98.7%
4031147 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 47.0 5.33e-01 79.7% 95.0%
5009786 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 56.0 5.23e-01 91.1% 77.0%
4032484 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 46.0 5.20e-01 78.5% 93.3%
2775 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 58.0 5.75e-01 96.2% 91.5%
3587013 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 47.0 5.29e-01 79.7% 95.0%
4955745 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 49.0 5.20e-01 88.6% 100.0%
2767750 101.1.4.8 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.65 54.0 5.31e-01 97.5% 86.9%
3617128 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.65 49.0 4.32e-01 81.0% 57.4%
3221171 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.64 49.0 4.40e-01 82.3% 60.0%
4970801 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 51.0 5.06e-01 89.9% 81.2%
5051582 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.62 47.0 5.01e-01 87.3% 100.0%
4977346 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 32.0 3.84e-01 86.1% 90.0%
3631293 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.55 37.0 3.47e-01 70.9% 75.0%
3783122 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.54 37.0 3.39e-01 70.9% 67.6%
4264297 101.1.2.760 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30824 0.52 38.0 3.25e-01 78.5% 91.1%
3744405 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.51 36.0 3.62e-01 77.2% 71.1%
3169327 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.51 36.0 3.38e-01 75.9% 80.0%
3442783 4952.1.1.0 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.51 39.0 3.59e-01 86.1% 79.1%
4162405 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 34.0 3.45e-01 93.7% 68.8%
5022370 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.50 40.0 4.02e-01 86.1% 98.8%