Back to structures

NC_048719.1__YP_009839149.1__HWB75_gp063__00180

Bact-Vir

NC_048719.1__YP_009839149.1__HWB75_gp063__00180

Identity

Accession:
NC_048719 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yo2A01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.89 70.0 7.62e-01 85.5% 100.0%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.76 56.0 4.50e-01 77.4% 45.2%
1afb100 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.72 51.0 3.72e-01 74.2% 99.4%
5cxdB01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.65 46.0 3.58e-01 72.6% 62.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3970671 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.95 63.0 5.78e-01 77.4% 56.0%
3974474 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.93 73.0 6.30e-01 82.3% 86.7%
3735594 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.88 62.0 5.32e-01 75.8% 48.4%
3470595 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.87 65.0 4.35e-01 77.4% 28.5%
3478703 192.29.1.24 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TMEM237 0.73 62.0 4.36e-01 95.2% 74.4%