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NC_048720.1__YP_009839307.1__HWB76_gp147__00109

Bact-Vir

NC_048720.1__YP_009839307.1__HWB76_gp147__00109

Identity

Accession:
NC_048720 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Annadreamyvirus› Streptomyces_phage_Blueeyedbeauty

TaxID: 2250336

Cluster

View cluster (56 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-63
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.89 76.0 7.75e-01 100.0% 94.3%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 70.0 6.79e-01 100.0% 80.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 74.0 6.65e-01 100.0% 76.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 74.0 7.00e-01 100.0% 92.2%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 6.29e-01 100.0% 81.1%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 69.0 6.69e-01 100.0% 90.3%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 67.0 6.18e-01 98.2% 80.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 67.0 6.59e-01 100.0% 94.9%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 66.0 6.51e-01 100.0% 98.3%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 61.0 6.27e-01 100.0% 96.2%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 50.0 3.53e-01 89.1% 24.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 64.0 6.00e-01 100.0% 91.0%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.90e-01 100.0% 91.2%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 6.12e-01 100.0% 90.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.67e-01 100.0% 79.4%
4wsiA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.43e-01 92.7% 95.5%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.67 47.0 4.62e-01 76.4% 77.0%
6ygnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 47.0 3.81e-01 78.2% 76.9%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 3.22e-01 85.5% 93.6%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 4.41e-01 94.5% 65.6%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.64 54.0 4.48e-01 100.0% 56.7%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.62 43.0 3.06e-01 74.5% 39.2%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.43e-01 94.5% 83.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.92e-01 100.0% 83.3%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 51.0 3.88e-01 100.0% 68.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.47e-01 100.0% 67.5%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 47.0 4.59e-01 98.2% 80.0%
2xzsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 43.0 3.76e-01 81.8% 90.1%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.59 49.0 4.12e-01 100.0% 78.8%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.58 46.0 4.14e-01 90.9% 75.6%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 46.0 2.90e-01 96.4% 26.0%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.36e-01 96.4% 55.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.49e-01 98.2% 81.2%
1w4bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 3.00e-01 89.1% 77.0%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 2.89e-01 96.4% 44.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.25e-01 98.2% 80.0%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.54e-01 100.0% 64.8%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.55 42.0 3.37e-01 90.9% 61.1%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 2.77e-01 85.5% 90.1%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.54 46.0 3.67e-01 100.0% 93.2%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.42e-01 94.5% 59.0%
2ownA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 44.0 2.91e-01 100.0% 50.8%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.17e-01 100.0% 59.3%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 40.0 3.25e-01 90.9% 92.7%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.51 45.0 3.63e-01 100.0% 58.7%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.07e-01 70.9% 96.6%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.51 42.0 3.35e-01 100.0% 80.6%
5i0dA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 40.0 3.10e-01 90.9% 100.0%
1twuA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 35.0 2.67e-01 80.0% 29.2%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.31e-01 100.0% 93.6%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 41.0 2.79e-01 100.0% 94.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3669492 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.91 70.0 5.04e-01 100.0% 32.1%
5036498 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.90 74.0 6.54e-01 100.0% 64.0%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.87 76.0 6.79e-01 100.0% 69.9%
3486326 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 71.0 7.10e-01 100.0% 87.3%
3328489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 70.0 6.41e-01 100.0% 68.6%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.86 75.0 7.33e-01 100.0% 86.7%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 75.0 7.28e-01 100.0% 86.7%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.85 74.0 5.64e-01 100.0% 43.3%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 74.0 6.65e-01 100.0% 86.7%
4093836 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 69.0 6.68e-01 100.0% 83.3%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 73.0 6.99e-01 100.0% 90.5%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.80 72.0 6.50e-01 100.0% 81.3%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 72.0 6.30e-01 100.0% 73.8%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 71.0 6.76e-01 100.0% 90.8%
3257276 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 70.0 5.38e-01 100.0% 48.0%
3561094 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 71.0 6.39e-01 100.0% 81.3%
3512419 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.79 72.0 6.14e-01 100.0% 68.2%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 5.06e-01 100.0% 42.5%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.79 71.0 5.97e-01 100.0% 72.2%
3483363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.22e-01 100.0% 78.5%
3881192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 4.81e-01 100.0% 31.8%
531 4.1.1.281 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KALRN 0.78 69.0 6.29e-01 100.0% 81.1%
3955235 4.1.1.183 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4926 0.78 71.0 6.21e-01 100.0% 68.8%
3607307 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 69.0 6.35e-01 100.0% 87.1%
3633434 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 69.0 6.34e-01 100.0% 80.0%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 68.0 6.46e-01 100.0% 93.8%
3826751 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 69.0 6.07e-01 100.0% 72.5%
4950603 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.76 67.0 5.28e-01 100.0% 72.2%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 66.0 5.74e-01 100.0% 65.0%
3713672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.15e-01 100.0% 58.3%
3935464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 6.34e-01 100.0% 88.3%
3214234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 64.0 6.27e-01 100.0% 93.3%
157323 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.90e-01 100.0% 91.2%
3601624 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.20e-01 100.0% 63.8%
3931417 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 63.0 6.20e-01 100.0% 96.7%
3815495 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 65.0 6.01e-01 100.0% 80.0%
3163776 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 49.0 3.65e-01 72.7% 94.6%
3589730 4.1.1.252 ↗ beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.69 59.0 5.29e-01 100.0% 81.2%
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.68 57.0 5.46e-01 100.0% 80.0%
5059773 2004.1.1.162 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.64 47.0 3.31e-01 83.6% 99.5%
3601734 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 47.0 3.02e-01 85.5% 90.6%
3421545 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.62 50.0 3.07e-01 94.5% 26.6%
3230359 207.1.1.66 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.62 53.0 3.31e-01 96.4% 18.0%
3404871 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.61 48.0 3.98e-01 92.7% 94.5%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 50.0 4.56e-01 98.2% 70.0%
4863266 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 47.0 4.53e-01 98.2% 76.9%
3944465 809.1.1.7 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF6392 0.59 42.0 3.74e-01 76.4% 72.9%
3890418 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.59 50.0 4.15e-01 100.0% 79.0%
3972281 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.58 42.0 4.02e-01 83.6% 66.2%
3750640 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.58 48.0 4.00e-01 100.0% 74.5%
3675472 5.1.5.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.56 46.0 3.13e-01 96.4% 31.5%
5073192 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.56 44.0 4.24e-01 89.1% 80.0%
3921013 3735.1.1.0 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein 0.55 45.0 2.43e-01 94.5% 6.1%
3845542 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.55 47.0 3.95e-01 100.0% 85.0%
4664970 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 40.0 4.36e-01 83.6% 97.8%
4680459 375.1.1.67 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.55 41.0 4.36e-01 85.5% 100.0%
3898522 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 4.06e-01 81.8% 86.0%
1807154 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 46.0 3.49e-01 100.0% 63.5%
4881914 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 43.0 3.02e-01 92.7% 36.3%
4972785 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 4.07e-01 92.7% 89.8%
4250963 2011.2.1.3 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.54 40.0 2.78e-01 80.0% 23.5%
4937307 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 46.0 3.22e-01 100.0% 51.6%
3710675 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.53 40.0 4.20e-01 90.9% 97.9%
4221174 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.53 40.0 3.49e-01 89.1% 66.3%
3390227 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.42e-01 92.7% 81.9%
3894031 330.1.1.6 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C 0.52 40.0 3.56e-01 87.3% 61.2%
3592221 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.40e-01 100.0% 65.3%
5703 211.1.1.22 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › YycE-like_N 0.51 35.0 3.28e-01 80.0% 57.1%
5027014 246.2.1.9 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.51 40.0 2.89e-01 92.7% 97.3%
4979182 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 43.0 2.63e-01 100.0% 17.2%
3821429 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.50 38.0 2.81e-01 85.5% 36.9%