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NC_048720.1__YP_009839363.1__HWB76_gp091__00165

Bact-Vir

NC_048720.1__YP_009839363.1__HWB76_gp091__00165

Identity

Accession:
NC_048720 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-130
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF24875.2 best DUF7736 63.2 2.90e-17 48.0% 96.6%
PF24875.2 DUF7736 37.0 4.30e-09 45.7% 94.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l7mA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 37.0 2.93e-01 70.9% 43.7%
1j0mA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.53 39.0 2.83e-01 98.4% 26.6%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.52 40.0 3.25e-01 81.1% 65.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4869998 829.1.1.0 a+b duplicates or obligate multimers › NinB › NinB › NinB 0.57 27.0 3.47e-01 92.1% 78.6%
1066180 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 37.0 2.93e-01 70.9% 43.7%
3953342 101.1.4.61 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 0.52 36.0 3.54e-01 97.6% 66.7%
4244937 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.51 45.0 3.46e-01 99.2% 95.4%
3606822 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.50 28.0 3.15e-01 89.0% 68.0%
4958939 7601.1.1.2 a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 0.50 41.0 3.07e-01 91.3% 71.5%
D2 high residues 141-223
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24792.2 best DUF7701 104.5 3.90e-30 100.0% 97.8%