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NC_048728.1__YP_009840910.1__HWB84_gp129__00114

Bact-Vir

NC_048728.1__YP_009840910.1__HWB84_gp129__00114

Identity

Accession:
NC_048728 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Gilsonvirus› Streptomyces_phage_Comrade

TaxID: 2301714

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-189
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.75 49.0 4.75e-01 90.4% 60.6%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.71 43.0 5.43e-01 87.9% 100.0%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.67 44.0 5.20e-01 90.4% 96.3%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.65 38.0 4.75e-01 90.4% 96.7%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.63 35.0 4.37e-01 88.5% 88.5%
7xc8A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.62 43.0 5.06e-01 87.3% 100.0%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.58 37.0 4.50e-01 88.5% 100.0%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.57 37.0 4.43e-01 90.4% 99.0%
2h5eA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 30.0 3.02e-01 91.7% 52.4%
3c9aA01 2.20.20.160 Mainly Beta › Single Sheet › Anthopleurin-A › 0.51 23.0 3.07e-01 76.4% 81.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3267279 1.1.2.41 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 0.89 66.0 7.60e-01 90.4% 99.2%
3695373 1.1.2.41 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 0.77 69.0 7.15e-01 94.9% 98.7%
3252188 1.1.2.33 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 0.70 48.0 5.12e-01 90.4% 80.0%
3165363 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.63 45.0 4.48e-01 93.0% 69.7%
3976753 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.62 43.0 4.48e-01 94.3% 74.7%
3206565 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.56 40.0 2.97e-01 96.8% 27.7%
3265561 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.55 48.0 4.56e-01 94.9% 97.8%
21 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.54 38.0 4.06e-01 94.3% 85.0%
3689960 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.51 30.0 3.78e-01 94.3% 100.0%