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NC_048732.1__YP_009841538.1__HWB88_gp01__00001

Bact-Vir

NC_048732.1__YP_009841538.1__HWB88_gp01__00001

Identity

Accession:
NC_048732 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-109
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13744.13 best HTH_37 38.7 9.70e-10 83.2% 80.0%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 66.0 7.31e-01 76.8% 94.7%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 48.0 5.91e-01 80.0% 95.0%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 46.0 5.48e-01 75.8% 83.3%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 52.0 5.83e-01 80.0% 88.7%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 51.0 6.00e-01 80.0% 95.5%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 52.0 5.87e-01 82.1% 90.3%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 53.0 5.87e-01 84.2% 88.3%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 49.0 5.74e-01 77.9% 100.0%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 52.0 5.49e-01 80.0% 81.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 52.0 5.31e-01 84.2% 75.6%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 49.0 5.07e-01 80.0% 71.4%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 51.0 5.83e-01 87.4% 97.1%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 51.0 5.80e-01 85.3% 97.1%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 50.0 5.70e-01 82.1% 94.3%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 53.0 5.64e-01 87.4% 87.8%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 53.0 5.79e-01 85.3% 93.5%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 50.0 5.70e-01 84.2% 100.0%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 46.0 5.53e-01 77.9% 100.0%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 53.0 5.81e-01 90.5% 98.7%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 47.0 5.51e-01 82.1% 100.0%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 5.40e-01 78.9% 86.6%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 46.0 4.97e-01 76.8% 79.0%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 5.56e-01 74.7% 93.4%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 5.55e-01 82.1% 95.9%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 54.0 5.67e-01 84.2% 92.9%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 51.0 5.23e-01 78.9% 88.2%
1gvnA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 48.0 5.01e-01 72.6% 92.0%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 46.0 4.98e-01 81.1% 83.5%
7zviA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 51.0 4.68e-01 78.9% 78.7%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 46.0 5.03e-01 84.2% 89.5%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 49.0 4.78e-01 78.9% 88.3%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 51.0 5.37e-01 84.2% 96.4%
6gpxB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.61 45.0 3.33e-01 80.0% 99.6%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 40.0 4.08e-01 75.8% 71.4%
3godB02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.59 49.0 3.83e-01 91.6% 96.2%
7dl9B02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.58 46.0 3.61e-01 86.3% 91.6%
2nnwA02 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 46.0 4.15e-01 86.3% 79.5%
5ixcA01 3.40.1090.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain 0.52 41.0 2.66e-01 85.3% 84.2%
3r31A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 39.0 2.89e-01 80.0% 54.5%
6fjxA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 38.0 2.73e-01 76.8% 87.5%
2j6lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 38.0 2.77e-01 81.1% 61.7%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.51 30.0 3.03e-01 83.2% 54.1%
3vglA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 41.0 3.47e-01 91.6% 62.4%
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 44.0 2.85e-01 94.7% 28.1%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965368 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.89 67.0 7.29e-01 78.9% 92.5%
3983992 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.85 64.0 6.97e-01 78.9% 93.8%
3604422 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 55.0 6.33e-01 71.6% 92.9%
2791 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.82 71.0 7.29e-01 91.6% 98.9%
3977908 101.1.4.20 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.82 66.0 6.67e-01 85.3% 90.5%
4084920 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 51.0 5.82e-01 81.1% 88.6%
None 0.78 52.0 6.11e-01 80.0% 98.5%
4975718 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 53.0 5.89e-01 72.6% 90.7%
4950501 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 51.0 6.01e-01 82.1% 100.0%
3587838 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 50.0 5.75e-01 83.2% 91.4%
3062945 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 53.0 5.97e-01 73.7% 95.8%
5036222 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.76 51.0 5.94e-01 82.1% 100.0%
3980119 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 53.0 6.13e-01 72.6% 98.6%
4978931 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 52.0 5.93e-01 80.0% 95.7%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 48.0 5.59e-01 80.0% 93.8%
4392992 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 55.0 5.99e-01 80.0% 91.3%
3973014 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 47.0 5.48e-01 83.2% 92.3%
None 0.74 53.0 5.83e-01 74.7% 93.3%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 50.0 4.74e-01 78.9% 59.1%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 49.0 4.99e-01 78.9% 68.4%
4984923 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 51.0 5.49e-01 72.6% 85.0%
3287571 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 56.0 5.87e-01 94.7% 89.4%
4979598 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 50.0 5.65e-01 73.7% 94.3%
5050179 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 46.0 5.52e-01 84.2% 100.0%
3972740 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.73 46.0 5.44e-01 83.2% 93.8%
4956880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 51.0 5.81e-01 73.7% 98.6%
5059226 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 53.0 5.73e-01 82.1% 91.3%
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 49.0 5.56e-01 80.0% 92.9%
4061717 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 50.0 4.82e-01 80.0% 62.9%
3952098 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 50.0 5.42e-01 71.6% 85.0%
1779783 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 53.0 5.72e-01 85.3% 92.3%
3285035 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 56.0 5.73e-01 84.2% 85.6%
3278834 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 49.0 5.60e-01 78.9% 94.3%
3970029 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 50.0 5.37e-01 80.0% 83.7%
4568698 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 45.0 5.45e-01 76.8% 100.0%
4031703 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 50.0 5.73e-01 83.2% 97.1%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 50.0 5.56e-01 86.3% 90.7%
3603069 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 51.0 5.79e-01 84.2% 100.0%
3504520 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 50.0 4.95e-01 80.0% 68.0%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 48.0 5.47e-01 78.9% 92.9%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 52.0 5.68e-01 90.5% 93.5%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 50.0 5.68e-01 82.1% 98.6%
2766 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 46.0 5.53e-01 77.9% 100.0%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 50.0 4.84e-01 82.1% 65.7%
4075146 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.71 50.0 4.48e-01 75.8% 53.1%
137778 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 48.0 5.51e-01 81.1% 98.5%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 50.0 5.54e-01 87.4% 94.7%
4585952 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.71 50.0 5.65e-01 83.2% 98.6%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 47.0 4.51e-01 78.9% 59.1%
3277653 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 49.0 5.20e-01 76.8% 81.2%
2888862 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 46.0 5.35e-01 77.9% 97.0%
3277922 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 51.0 5.67e-01 75.8% 96.0%
4033847 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 51.0 4.96e-01 86.3% 69.5%
4678741 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 52.0 5.71e-01 89.5% 100.0%
4969117 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 53.0 5.23e-01 82.1% 76.0%
3591049 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 50.0 4.29e-01 83.2% 48.0%
4008186 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 49.0 4.50e-01 80.0% 57.5%
3287665 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.69 51.0 5.62e-01 83.2% 97.3%
4947991 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 47.0 5.18e-01 75.8% 89.3%
3234830 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.68 53.0 3.64e-01 82.1% 91.6%
5046258 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 47.0 5.19e-01 77.9% 89.3%
2775 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 52.0 5.51e-01 83.2% 95.1%
166410 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.67 46.0 5.03e-01 84.2% 89.5%
3289357 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.66 54.0 5.41e-01 87.4% 98.9%
3228549 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.66 47.0 3.31e-01 73.7% 96.5%
3987782 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.65 47.0 4.69e-01 75.8% 73.0%
3978875 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 47.0 4.40e-01 81.1% 63.5%
3236835 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.64 49.0 3.46e-01 82.1% 94.9%
3230165 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.59 54.0 3.71e-01 100.0% 90.3%
5046112 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.56 49.0 3.77e-01 100.0% 68.8%
3932849 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.53 42.0 2.99e-01 85.3% 100.0%
5055279 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.52 42.0 3.29e-01 87.4% 94.6%
3923359 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.52 46.0 3.27e-01 97.9% 64.1%