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NC_048734.1__YP_009841709.1__HWB90_gp041__00041

Bact-Vir

NC_048734.1__YP_009841709.1__HWB90_gp041__00041

Identity

Accession:
NC_048734 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-88
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hc7A03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.57 38.0 3.95e-01 100.0% 75.7%
2q8pA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 41.0 3.27e-01 81.5% 95.9%
5iwuA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.51 38.0 2.97e-01 81.5% 59.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4252001 328.2.1.1 a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 0.57 38.0 3.84e-01 100.0% 68.8%
3596583 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 44.0 2.78e-01 86.4% 75.3%