←Back to structures

NC_048734.1__YP_009841761.1__HWB90_gp096__00093

Bact-Vir

Identity

Accession:: NC_048734 ↗
Kingdom:: phage

Quality

79.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fowlmouthvirus› Mycobacterium_phage_Fowlmouth

TaxID: 2419978

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-62

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4e1pA00	3.30.60.230	Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain	0.70	52.0	5.47e-01	100.0%	87.3%
2fd4A00	3.30.40.110	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain	0.56	45.0	3.85e-01	93.3%	63.8%
2k3iA01	3.30.70.860	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.53	36.0	3.20e-01	70.0%	64.7%
3uc2A00	2.60.40.3340	Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426	0.51	43.0	3.44e-01	95.0%	71.8%
4uy8X00	2.30.170.40	Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24	0.51	39.0	3.71e-01	90.0%	81.8%
3n7cA00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.50	41.0	3.45e-01	93.3%	93.5%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4965229	377.1.1.133 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF7569	0.84	65.0	6.99e-01	98.3%	100.0%
3525801	6171.1.1.0 ↗	alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases	0.76	53.0	3.82e-01	93.3%	26.7%
4945239	377.1.1.0 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like	0.64	42.0	4.70e-01	85.0%	100.0%
5074387	1.1.3.0 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB	0.63	40.0	4.23e-01	78.3%	73.6%
5076094	376.1.3.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger	0.60	43.0	4.38e-01	96.7%	76.7%
4882574	375.1.1.35 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP	0.60	49.0	4.96e-01	91.7%	93.1%
4154378	4232.1.1.1 ↗	few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28	0.58	48.0	4.75e-01	93.3%	96.9%
3194406	2003.1.5.70 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_15	0.56	38.0	2.46e-01	70.0%	26.0%
3357798	3082.1.1.3 ↗	extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › Pro_isomerase	0.54	37.0	4.17e-01	78.3%	100.0%
4958102	1.1.3.2 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin	0.54	41.0	4.06e-01	96.7%	78.5%
4532986	4232.1.1.1 ↗	few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28	0.54	43.0	4.30e-01	93.3%	96.9%
3468511	2485.1.1.1 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin	0.52	32.0	3.29e-01	76.7%	65.5%
None	—		0.52	40.0	2.85e-01	91.7%	30.8%
5001098	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	37.0	3.25e-01	76.7%	81.1%