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NC_048751.1__YP_009843791.1__HWC07_gp110__00110

Bact-Vir

NC_048751.1__YP_009843791.1__HWC07_gp110__00110

Identity

Accession:
NC_048751 ↗
Kingdom:
phage

Quality

52.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lietduovirus› Pantoea_phage_vB_PagM_LIET2

TaxID: 2508071

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-98
PDB
D2 high residues 114-155
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.77 60.0 3.59e-01 88.1% 12.7%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.75 57.0 4.67e-01 88.1% 100.0%
1c9fA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.75 55.0 4.43e-01 83.3% 41.4%
2azeB00 6.10.250.540 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 38.0 2.79e-01 85.7% 20.8%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.71 54.0 4.47e-01 90.5% 91.8%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.71 56.0 4.81e-01 100.0% 62.0%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 53.0 4.70e-01 88.1% 60.0%
5b7sB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.69 56.0 3.96e-01 92.9% 76.3%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.68 57.0 4.80e-01 100.0% 64.9%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.67 46.0 2.95e-01 73.8% 17.4%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.66 49.0 3.79e-01 81.0% 73.9%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 4.13e-01 100.0% 38.5%
1je0C00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.65 45.0 2.81e-01 73.8% 61.2%
6w08A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.65 49.0 2.94e-01 90.5% 14.2%
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.64 45.0 4.53e-01 88.1% 77.8%
1v5tA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 51.0 4.06e-01 92.9% 86.7%
4bfrB02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 48.0 3.46e-01 85.7% 33.6%
4d2kB00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 46.0 3.85e-01 83.3% 45.0%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 50.0 3.29e-01 100.0% 19.5%
2memA00 3.90.1150.190 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › SLED domain 0.62 52.0 3.84e-01 100.0% 84.9%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 54.0 3.26e-01 100.0% 95.4%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 52.0 3.41e-01 100.0% 55.8%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 3.37e-01 78.6% 35.7%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.61 46.0 3.95e-01 88.1% 53.2%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 49.0 3.83e-01 97.6% 53.4%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 46.0 3.83e-01 88.1% 47.0%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.60 49.0 3.09e-01 97.6% 83.5%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 54.0 3.93e-01 100.0% 41.7%
1h0hB01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 51.0 3.46e-01 95.2% 77.3%
1zxhA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 44.0 4.21e-01 88.1% 100.0%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 44.0 3.31e-01 90.5% 28.7%
4yg6B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 3.38e-01 100.0% 53.4%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.60 40.0 3.80e-01 73.8% 54.5%
4ehoB03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.59 50.0 3.32e-01 97.6% 55.3%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 39.0 2.73e-01 71.4% 22.4%
3tqfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 41.0 2.91e-01 95.2% 20.6%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.58 49.0 3.39e-01 100.0% 49.7%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 42.0 3.32e-01 81.0% 37.5%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 45.0 3.05e-01 88.1% 86.0%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 46.0 3.85e-01 92.9% 56.6%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 42.0 3.55e-01 85.7% 100.0%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 3.68e-01 100.0% 59.6%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.30e-01 76.2% 45.5%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.55 47.0 2.78e-01 100.0% 95.0%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.19e-01 97.6% 77.4%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 2.99e-01 100.0% 33.7%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.54 44.0 3.22e-01 97.6% 87.1%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.43e-01 95.2% 48.5%
2d8iA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 45.0 3.64e-01 97.6% 65.9%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 45.0 3.49e-01 90.5% 70.9%
5cygB00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 47.0 2.89e-01 100.0% 25.0%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.53 44.0 2.74e-01 92.9% 43.1%
1e7uA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 40.0 2.83e-01 92.9% 50.3%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 3.62e-01 100.0% 77.6%
4n01A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 41.0 3.07e-01 90.5% 88.9%
2q2gB02 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.52 40.0 3.47e-01 100.0% 51.9%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 2.71e-01 92.9% 33.3%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 40.0 2.73e-01 90.5% 28.1%
4lmyA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.51 37.0 3.47e-01 100.0% 61.1%
1y56A01 3.10.20.440 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 2Fe-2S iron-sulphur cluster binding domain, sarcosine oxidase, alpha subunit, N-terminal domain 0.50 37.0 2.97e-01 88.1% 36.2%
3mweB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 44.0 3.07e-01 100.0% 31.2%
1rybA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.50 39.0 2.73e-01 100.0% 40.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027687 330.3.1.0 ↗ a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.75 65.0 5.98e-01 100.0% 90.9%
3466238 206.1.1.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.75 48.0 2.72e-01 100.0% 6.2%
4028013 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.73 63.0 5.26e-01 100.0% 70.7%
3236988 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.71 58.0 4.75e-01 92.9% 100.0%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 50.0 3.24e-01 73.8% 48.9%
5043001 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.71 47.0 3.43e-01 100.0% 27.6%
1442686 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.71 54.0 4.47e-01 90.5% 91.8%
3990521 5050.1.1.31 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › SLC52_ribofla_tr 0.70 48.0 3.15e-01 71.4% 45.7%
5021137 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 47.0 2.73e-01 71.4% 18.2%
3984933 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.69 58.0 4.66e-01 100.0% 55.6%
3587660 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.68 51.0 3.58e-01 85.7% 25.0%
4009814 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.68 57.0 5.06e-01 100.0% 76.9%
3942150 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.68 57.0 4.61e-01 100.0% 55.6%
3988478 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.68 52.0 4.09e-01 90.5% 37.8%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 46.0 3.90e-01 73.8% 46.7%
3684015 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.67 46.0 3.46e-01 71.4% 81.0%
5005019 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 49.0 2.87e-01 83.3% 21.3%
3977489 377.1.1.117 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 0.66 46.0 4.50e-01 78.6% 72.0%
4027686 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.65 54.0 5.04e-01 97.6% 92.7%
3589192 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.64 40.0 3.23e-01 100.0% 31.2%
4268395 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.64 48.0 3.97e-01 90.5% 41.6%
5010744 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.63 48.0 4.20e-01 83.3% 89.2%
5079277 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.62 43.0 3.93e-01 76.2% 53.4%
3586391 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.62 48.0 2.87e-01 85.7% 20.3%
4569264 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.62 45.0 3.68e-01 83.3% 36.8%
5008091 221.10.1.1 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.62 46.0 4.06e-01 88.1% 52.9%
3271779 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 54.0 3.73e-01 100.0% 31.7%
5023262 327.11.2.82 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.61 46.0 3.98e-01 81.0% 90.8%
4995729 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 52.0 3.28e-01 100.0% 26.4%
4505972 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.61 43.0 2.59e-01 76.2% 14.1%
3931122 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 49.0 3.78e-01 90.5% 41.1%
3702708 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 44.0 3.47e-01 81.0% 41.1%
5074130 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.60 49.0 3.03e-01 92.9% 49.8%
3711985 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.59 50.0 3.12e-01 97.6% 35.6%
4965147 5001.1.1.292 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM 0.59 40.0 2.60e-01 73.8% 27.7%
3204628 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.59 44.0 3.52e-01 90.5% 80.0%
3261872 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 42.0 3.69e-01 85.7% 52.0%
3967506 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.58 47.0 2.95e-01 92.9% 61.3%
3627479 221.1.1.4 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.58 44.0 3.32e-01 92.9% 31.2%
4437052 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.58 49.0 3.40e-01 97.6% 58.0%
3233262 706.1.1.0 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE 0.58 41.0 4.30e-01 76.2% 97.1%
3587620 304.55.1.22 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › MobL 0.57 39.0 2.46e-01 73.8% 17.1%
5015520 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 48.0 3.08e-01 95.2% 76.2%
4541289 2002.1.1.154 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_1 0.56 47.0 2.78e-01 100.0% 22.9%
4585964 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.56 44.0 2.88e-01 88.1% 67.4%
3367891 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.55 44.0 2.65e-01 90.5% 15.6%
4797400 220.3.1.5 ↗ beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop_FD, PH_Rhabdo_glycop 0.55 40.0 3.81e-01 76.2% 81.2%
3791945 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.55 49.0 3.09e-01 100.0% 42.2%
3248306 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 40.0 3.42e-01 88.1% 89.4%
3325708 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.55 46.0 2.75e-01 92.9% 16.7%
5078945 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.55 38.0 3.35e-01 73.8% 96.9%
3834654 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 41.0 3.45e-01 90.5% 85.9%
3575090 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 44.0 3.03e-01 100.0% 41.3%
5028281 2007.1.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.54 47.0 3.16e-01 100.0% 100.0%
4022087 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.54 37.0 2.68e-01 73.8% 24.7%
3224392 221.1.1.202 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF30122 0.54 40.0 3.32e-01 90.5% 98.9%
3474254 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.54 47.0 3.34e-01 100.0% 35.6%
4981961 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.54 43.0 3.03e-01 97.6% 83.1%
3494392 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.54 44.0 2.61e-01 92.9% 50.3%
3887061 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 38.0 3.24e-01 83.3% 42.4%
5077288 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.53 43.0 2.92e-01 100.0% 69.7%
4142311 109.4.1.1297 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.53 45.0 2.54e-01 100.0% 14.5%
5050894 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.52 45.0 2.81e-01 100.0% 20.8%
5002836 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.52 41.0 2.50e-01 100.0% 10.9%
5039979 604.2.1.1 ↗ alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C 0.51 40.0 2.90e-01 90.5% 54.8%
3958996 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 2.69e-01 100.0% 57.9%
5060820 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.51 45.0 2.55e-01 100.0% 32.0%
3995931 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 43.0 2.50e-01 97.6% 11.6%
3743176 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.50 45.0 3.05e-01 100.0% 31.7%