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NC_048753.1__YP_009844057.1__HWC09_gp124__00057

Bact-Vir

NC_048753.1__YP_009844057.1__HWC09_gp124__00057

Identity

Accession:
NC_048753 ↗
Kingdom:
phage

Quality

59.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-116
PDB
D2 high residues 529-612
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.66 42.0 4.28e-01 75.0% 66.3%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 52.0 4.18e-01 92.9% 46.1%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.63 38.0 4.26e-01 77.4% 82.0%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.62 50.0 3.32e-01 85.7% 97.1%
2pvaA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.62 49.0 3.28e-01 85.7% 93.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 4.69e-01 79.8% 92.4%
2x1cB01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.61 50.0 3.40e-01 86.9% 89.7%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.61 39.0 3.99e-01 88.1% 65.5%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 49.0 4.17e-01 86.9% 57.8%
1ux6A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 43.0 3.28e-01 78.6% 75.5%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 50.0 3.55e-01 100.0% 63.0%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.43e-01 100.0% 48.8%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 48.0 3.18e-01 98.8% 42.4%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.67e-01 72.6% 67.5%
1p49A03 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 39.0 3.60e-01 73.8% 61.1%
3lmlA03 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 3.87e-01 84.5% 72.9%
3loyA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 4.01e-01 84.5% 85.1%
5ahoA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 44.0 3.39e-01 91.7% 75.9%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.38e-01 81.0% 52.9%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.31e-01 79.8% 54.2%
7bsbI01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.53 38.0 3.36e-01 77.4% 86.6%
1cc1L00 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.51 43.0 2.69e-01 94.0% 84.2%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.58e-01 91.7% 54.3%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.56e-01 95.2% 53.8%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.37e-01 82.1% 59.0%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.51 37.0 3.48e-01 78.6% 89.5%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.57e-01 90.5% 59.1%
2xzmW01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.51 40.0 3.64e-01 86.9% 77.1%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.50 43.0 3.58e-01 100.0% 79.5%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342741 243.19.1.3 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N 0.86 71.0 7.13e-01 86.9% 88.2%
3967853 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.83 75.0 6.63e-01 96.4% 73.9%
3973700 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.82 73.0 6.98e-01 96.4% 83.2%
3974671 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.78 69.0 6.89e-01 94.0% 98.8%
3230371 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.77 46.0 4.21e-01 78.6% 46.4%
3178465 719.1.1.8 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF29965 0.68 49.0 4.32e-01 75.0% 94.2%
3612090 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 42.0 4.76e-01 71.4% 88.3%
6667 4221.1.1.1 a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 0.66 42.0 4.32e-01 75.0% 67.9%
2701923 243.3.1.6 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin 0.66 50.0 4.75e-01 81.0% 93.9%
4927376 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 55.0 3.64e-01 91.7% 47.0%
3934185 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 48.0 4.06e-01 83.3% 54.0%
5039412 5.1.4.665 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.61 55.0 3.54e-01 100.0% 42.8%
3935387 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.60 53.0 3.82e-01 98.8% 43.3%
3249061 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.59 49.0 3.27e-01 92.9% 38.5%
2998021 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.57 46.0 3.05e-01 86.9% 72.6%
3666734 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.57 40.0 3.52e-01 94.0% 47.7%
4332836 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 3.04e-01 91.7% 20.5%
4003998 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.56 42.0 3.69e-01 81.0% 77.7%
4001295 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.56 48.0 3.25e-01 100.0% 56.9%
3891698 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 46.0 3.24e-01 92.9% 46.6%
3057961 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.55 42.0 3.57e-01 82.1% 52.5%
3996209 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.55 43.0 3.53e-01 83.3% 46.7%
3823729 5.1.4.222 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.55 48.0 3.20e-01 98.8% 42.2%
3992780 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 48.0 3.42e-01 98.8% 62.3%
3933425 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 46.0 4.21e-01 96.4% 80.0%
5035305 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 42.0 4.35e-01 92.9% 91.3%
3939969 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.54 41.0 2.78e-01 81.0% 24.0%
3925272 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.53 43.0 3.45e-01 91.7% 87.6%
1076327 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 39.0 3.25e-01 79.8% 51.3%
5078664 4018.1.1.0 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases 0.52 43.0 3.74e-01 92.9% 83.0%
3509392 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 39.0 3.19e-01 81.0% 44.4%
999017 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 42.0 3.59e-01 92.9% 54.3%
3519451 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 44.0 3.67e-01 92.9% 55.2%
3991202 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.51 39.0 3.30e-01 81.0% 51.4%
3211840 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 40.0 3.45e-01 86.9% 82.1%
5002093 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 38.0 3.16e-01 79.8% 50.0%
3605414 243.6.1.10 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA_NSUN2 0.51 41.0 3.82e-01 90.5% 89.9%
3574012 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 37.0 3.15e-01 79.8% 49.7%
D3 high residues 665-788
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 61.0 5.67e-01 98.4% 71.6%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 54.0 5.11e-01 98.4% 67.6%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 58.0 5.48e-01 98.4% 74.1%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 59.0 5.21e-01 98.4% 63.3%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 57.0 5.79e-01 97.6% 88.5%
3gneB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 4.82e-01 98.4% 85.1%
2y38A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 59.0 4.76e-01 98.4% 74.7%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 59.0 5.49e-01 99.2% 89.5%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 57.0 5.13e-01 97.6% 86.3%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 45.0 4.89e-01 96.8% 88.1%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 57.0 4.93e-01 99.2% 63.6%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 57.0 5.28e-01 98.4% 82.1%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 57.0 5.21e-01 97.6% 75.5%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 43.0 5.01e-01 79.8% 100.0%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 43.0 4.99e-01 76.6% 100.0%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.63 51.0 4.87e-01 92.7% 75.9%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 56.0 4.59e-01 100.0% 77.2%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.62 47.0 5.00e-01 96.8% 93.4%
4opcA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 46.0 3.14e-01 78.2% 27.0%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.61 54.0 5.02e-01 98.4% 77.9%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 5.25e-01 98.4% 91.7%
1uxbA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.60 48.0 4.27e-01 87.1% 97.3%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 5.20e-01 98.4% 92.6%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.85e-01 92.7% 96.0%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 5.17e-01 97.6% 96.9%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 4.74e-01 91.9% 95.8%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 5.06e-01 98.4% 89.3%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 40.0 4.68e-01 94.4% 98.9%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.58 46.0 4.46e-01 100.0% 75.7%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 3.96e-01 98.4% 97.5%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 4.18e-01 98.4% 80.2%
1ux6A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.32e-01 98.4% 88.9%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 4.85e-01 100.0% 92.5%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.15e-01 97.6% 82.4%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 4.55e-01 75.0% 99.0%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.35e-01 98.4% 83.9%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.97e-01 98.4% 92.4%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.32e-01 98.4% 83.5%
1eerC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 4.59e-01 97.6% 96.9%
3ni8A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 39.0 3.80e-01 71.8% 100.0%
1x53A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 39.0 3.84e-01 70.2% 100.0%
2m83A00 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.56 47.0 4.57e-01 96.0% 80.6%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.55 44.0 4.37e-01 86.3% 95.5%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.08e-01 99.2% 79.2%
3kd4A03 2.60.120.1130 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 4.35e-01 87.1% 94.9%
4odbA00 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.54 43.0 4.01e-01 86.3% 81.5%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.23e-01 97.6% 87.9%
1nrkA03 2.40.30.160 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 34.0 3.49e-01 73.4% 63.1%
2d44A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.61e-01 100.0% 88.4%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 4.65e-01 99.2% 87.0%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.54 47.0 4.34e-01 97.6% 94.4%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.11e-01 100.0% 73.2%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.72e-01 87.9% 85.1%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 3.57e-01 71.0% 98.7%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 4.11e-01 97.6% 87.8%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.53 42.0 4.11e-01 84.7% 89.9%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 32.0 3.87e-01 75.0% 98.7%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.11e-01 100.0% 92.2%
1kkeA02 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.53 42.0 4.11e-01 87.1% 92.9%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 38.0 4.12e-01 74.2% 99.0%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.10e-01 98.4% 85.8%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.52 39.0 4.22e-01 95.2% 99.0%
2axwA01 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.52 43.0 4.38e-01 96.8% 94.1%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 33.0 3.90e-01 70.2% 98.7%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 38.0 3.69e-01 76.6% 85.2%
1imhC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 4.27e-01 92.7% 97.2%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.52 46.0 3.82e-01 100.0% 84.6%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 4.17e-01 97.6% 94.7%
1przA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.51 45.0 3.92e-01 99.2% 90.3%
1wzlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 4.40e-01 96.0% 95.0%
3vv1A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 4.24e-01 97.6% 93.6%
4irzA02 2.60.40.1460 Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 0.50 42.0 3.90e-01 91.9% 94.3%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3555892 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.75 61.0 5.50e-01 98.4% 62.9%
5035593 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 59.0 6.35e-01 94.4% 100.0%
4937335 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 64.0 5.76e-01 100.0% 70.6%
4960572 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 60.0 5.49e-01 99.2% 69.7%
5064593 10.1.2.181 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.70 57.0 5.64e-01 96.8% 82.3%
360238 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 59.0 5.21e-01 99.2% 63.1%
4127135 10.32.1.12 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.69 56.0 5.19e-01 99.2% 69.7%
3933402 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 50.0 5.16e-01 98.4% 81.7%
3999276 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.68 59.0 5.15e-01 98.4% 62.7%
3596678 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 56.0 5.95e-01 97.6% 100.0%
3277196 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.68 45.0 5.27e-01 76.6% 97.6%
3180910 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 54.0 5.26e-01 97.6% 75.7%
3663362 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 57.0 5.27e-01 99.2% 70.6%
5042811 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 55.0 5.62e-01 97.6% 90.8%
4099249 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 61.0 5.62e-01 99.2% 78.1%
5064594 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 60.0 5.57e-01 100.0% 77.4%
5083095 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 61.0 5.53e-01 99.2% 74.4%
4971701 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 48.0 5.27e-01 98.4% 93.0%
3773390 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.67 56.0 5.06e-01 98.4% 65.9%
5049677 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.67 50.0 4.91e-01 77.4% 96.9%
4944752 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 55.0 5.65e-01 91.9% 97.5%
4981533 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 49.0 5.34e-01 91.1% 93.3%
4011220 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 56.0 5.67e-01 99.2% 95.2%
5005647 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 44.0 4.93e-01 96.0% 92.6%
3800367 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.65 47.0 4.81e-01 75.8% 79.2%
4942960 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 5.08e-01 92.7% 77.9%
185062 244.1.1.16 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GGR_cat 0.64 45.0 5.25e-01 75.8% 100.0%
4944414 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.64 48.0 3.25e-01 78.2% 27.2%
3396396 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.64 57.0 4.77e-01 98.4% 63.3%
3342352 10.32.1.210 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.64 50.0 5.29e-01 98.4% 94.5%
3342087 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.64 57.0 4.72e-01 98.4% 81.7%
3277081 11.1.1.1315 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034, DUF7743 0.64 54.0 3.94e-01 90.3% 81.8%
4937833 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.63 48.0 4.44e-01 79.8% 78.8%
4951619 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 51.0 5.13e-01 98.4% 86.3%
4172901 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 49.0 5.06e-01 98.4% 88.7%
4962064 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.63 48.0 4.38e-01 79.8% 81.2%
3809848 10.32.1.199 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF642 0.62 52.0 4.74e-01 99.2% 67.1%
5022596 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 47.0 3.29e-01 78.2% 32.3%
5029520 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.62 49.0 4.72e-01 83.1% 86.4%
5043889 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.62 47.0 4.40e-01 79.8% 76.8%
3498711 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.62 55.0 4.91e-01 98.4% 80.0%
4334755 244.1.1.16 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GGR_cat 0.62 41.0 4.19e-01 75.8% 68.0%
3207356 10.1.1.22 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.61 53.0 4.61e-01 97.6% 90.5%
3500404 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 43.0 4.65e-01 97.6% 90.0%
4972312 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.61 46.0 3.10e-01 78.2% 27.0%
4015056 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 53.0 4.22e-01 98.4% 76.9%
4022701 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 43.0 4.64e-01 92.7% 90.0%
5021697 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.60 46.0 4.38e-01 79.8% 83.4%
3535343 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.60 53.0 5.05e-01 99.2% 86.7%
4590266 10.1.1.24 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Cleaved_Adhesin 0.60 53.0 4.59e-01 98.4% 66.7%
3296624 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 54.0 4.95e-01 98.4% 79.4%
3608754 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.60 53.0 4.42e-01 100.0% 84.9%
224055 10.32.1.215 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29167 0.60 53.0 5.00e-01 98.4% 83.8%
3489254 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 50.0 4.42e-01 92.7% 61.6%
3927098 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 45.0 4.71e-01 97.6% 90.9%
5035837 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.59 46.0 4.67e-01 83.1% 95.2%
3913258 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.59 52.0 5.03e-01 98.4% 92.1%
3830260 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 53.0 3.43e-01 99.2% 22.5%
4874426 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.59 51.0 5.07e-01 98.4% 90.2%
3917421 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.58 51.0 4.85e-01 98.4% 90.7%
3235673 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 51.0 4.49e-01 97.6% 93.5%
None 0.58 43.0 3.03e-01 78.2% 29.8%
3555135 11.1.1.126 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N 0.58 42.0 4.50e-01 91.9% 85.5%
4991183 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.58 43.0 2.98e-01 79.0% 27.5%
5071112 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 4.91e-01 97.6% 88.1%
3638266 11.1.1.554 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PhoD_2 0.57 41.0 4.51e-01 85.5% 92.0%
109 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 41.0 4.52e-01 75.0% 98.0%
4257104 2003.1.2.300 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.57 43.0 3.01e-01 79.0% 29.6%
None 0.57 43.0 3.01e-01 79.0% 29.6%
5040646 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 51.0 4.83e-01 100.0% 85.3%
3235443 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 4.58e-01 91.1% 98.9%
1877632 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.57 42.0 4.54e-01 77.4% 98.0%
5000431 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 47.0 3.23e-01 89.5% 49.9%
4995368 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.56 44.0 4.27e-01 82.3% 80.0%
5054945 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 49.0 4.99e-01 99.2% 98.3%
3491151 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.58e-01 97.6% 79.3%
1790393 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 35.0 4.14e-01 74.2% 96.3%
4409090 1.1.8.7 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.55 34.0 4.03e-01 72.6% 100.0%
3967745 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 33.0 4.03e-01 74.2% 98.7%
4319764 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 35.0 3.70e-01 77.4% 71.8%
3422908 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.55 39.0 4.37e-01 73.4% 100.0%
3500821 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.54 46.0 4.51e-01 91.9% 94.8%
4519252 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.54 36.0 3.80e-01 71.0% 74.8%
3214460 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.53 40.0 4.05e-01 96.8% 81.7%
4479457 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.53 47.0 4.30e-01 98.4% 91.1%
3730935 2003.1.2.102 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 0.52 43.0 2.93e-01 89.5% 50.6%
3224127 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.52 37.0 4.12e-01 92.7% 100.0%
3858089 11.1.1.991 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28112 0.52 40.0 4.26e-01 85.5% 94.3%
4173804 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 35.0 3.93e-01 72.6% 95.6%
4342941 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.51 34.0 3.97e-01 74.2% 100.0%
3525543 11.1.1.991 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28112 0.50 41.0 4.28e-01 91.9% 98.2%
1402 11.1.1.46 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N 0.50 43.0 4.41e-01 96.0% 95.8%
3703952 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 4.29e-01 93.5% 98.2%
D4 high residues 1290-1442_1464-1475
PDB
D5 medium residues 1060-1117
PDB
D6 medium residues 1118-1271
PDB