←Back to structures
NC_048756.1__YP_009844772.1__HWC12_gp148__00169
Bact-VirNC_048756.1__YP_009844772.1__HWC12_gp148__00169
Identity
- Accession:
- NC_048756 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2557579
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-81
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 45.0 | 4.13e-01 | 82.9% | 66.0% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 45.0 | 4.05e-01 | 82.9% | 64.2% |
| 2v7kA02 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 50.0 | 3.69e-01 | 98.7% | 99.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230011 | 6106.1.1.0 ↗ | extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY | 0.76 | 39.0 | 3.72e-01 | 81.6% | 45.9% |
| 5057610 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.67 | 53.0 | 3.18e-01 | 88.2% | 31.1% |
| 3989542 | 2484.1.1.269 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 | 0.55 | 41.0 | 3.60e-01 | 76.3% | 66.7% |
| 4078369 | 223.1.1.157 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_3 | 0.55 | 47.0 | 3.56e-01 | 100.0% | 70.0% |
| 5056667 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.54 | 43.0 | 2.74e-01 | 92.1% | 66.9% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 46.0 | 3.96e-01 | 100.0% | 61.7% |