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NC_048756.1__YP_009844772.1__HWC12_gp148__00169

Bact-Vir

NC_048756.1__YP_009844772.1__HWC12_gp148__00169

Identity

Accession:
NC_048756 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-81
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 45.0 4.13e-01 82.9% 66.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 45.0 4.05e-01 82.9% 64.2%
2v7kA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 50.0 3.69e-01 98.7% 99.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230011 6106.1.1.0 extended segments › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY › Photosystem II protein Y, psbY 0.76 39.0 3.72e-01 81.6% 45.9%
5057610 2498.1.1.6 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.67 53.0 3.18e-01 88.2% 31.1%
3989542 2484.1.1.269 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 0.55 41.0 3.60e-01 76.3% 66.7%
4078369 223.1.1.157 a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_3 0.55 47.0 3.56e-01 100.0% 70.0%
5056667 3352.1.1.2 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 0.54 43.0 2.74e-01 92.1% 66.9%
4929483 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.52 46.0 3.96e-01 100.0% 61.7%