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NC_048757.1__YP_009844916.1__HWC13_gp107__00107

Bact-Vir

NC_048757.1__YP_009844916.1__HWC13_gp107__00107

Identity

Accession:
NC_048757 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ravarandavirus› Nodularia_phage_vB_NspS-kac68v161

TaxID: 2557582

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-99
PDB
Domain cluster: rep: HM032710.1__ADI96472.1__Ac42p236__00234__D2-92
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.73 32.0 3.62e-01 99.0% 52.6%
2o0pA00 3.20.170.20 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 0.66 57.0 5.49e-01 99.0% 83.3%
3hkvA00 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.65 59.0 4.72e-01 100.0% 62.5%
4gv2A02 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.63 57.0 4.46e-01 100.0% 71.4%
1gs0A02 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.62 55.0 4.29e-01 100.0% 69.8%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 37.0 3.89e-01 90.8% 70.8%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 32.0 3.81e-01 90.8% 80.3%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 3.78e-01 89.8% 78.9%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 35.0 3.61e-01 89.8% 67.4%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.52 29.0 3.55e-01 96.9% 93.0%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 31.0 3.56e-01 86.7% 83.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4682722 237.1.1.5 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC 0.71 65.0 5.09e-01 100.0% 57.5%
5060086 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.70 58.0 5.89e-01 100.0% 91.6%
4505975 237.1.1.5 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC 0.70 64.0 5.35e-01 100.0% 72.7%
3344114 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.69 63.0 5.88e-01 100.0% 85.8%
4299634 237.1.1.5 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC 0.69 63.0 5.24e-01 100.0% 69.7%
4059275 237.1.1.5 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC 0.68 62.0 5.15e-01 100.0% 81.2%
4937896 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.66 58.0 5.77e-01 100.0% 94.0%
3324343 237.1.1.1 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP 0.65 59.0 4.73e-01 100.0% 62.7%
3953513 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.65 59.0 5.61e-01 100.0% 86.1%
4241488 237.1.1.5 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC 0.65 59.0 5.03e-01 100.0% 72.9%
3410782 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.65 57.0 4.81e-01 100.0% 58.7%
4498412 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.63 56.0 4.88e-01 100.0% 71.3%
3183175 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.62 56.0 4.76e-01 100.0% 70.0%
3596575 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.61 54.0 5.27e-01 100.0% 90.0%
3614840 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.61 54.0 5.27e-01 100.0% 90.0%
4157545 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.61 54.0 4.65e-01 100.0% 63.3%
3635641 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.61 54.0 4.68e-01 100.0% 85.1%
3663293 304.12.1.10 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › ABCA12_C 0.53 31.0 3.62e-01 86.7% 81.4%
3928208 304.163.1.0 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.52 31.0 3.48e-01 86.7% 77.3%