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NC_048757.1__YP_009844927.1__HWC13_gp193__00118
Bact-VirNC_048757.1__YP_009844927.1__HWC13_gp193__00118
Identity
- Accession:
- NC_048757 ↗
- Kingdom:
- phage
Quality
63.9
mean pLDDT
Taxonomy
TaxID: 2557582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-227
Domain cluster:
rep: JN638751.1__AEO93599.1__G_340__00332__D113-243
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.89 | 85.0 | 6.89e-01 | 100.0% | 79.9% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.88 | 84.0 | 6.76e-01 | 100.0% | 57.1% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.87 | 84.0 | 7.03e-01 | 100.0% | 87.2% |
| 3lycA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.87 | 83.0 | 6.73e-01 | 100.0% | 58.9% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 77.0 | 5.71e-01 | 100.0% | 65.0% |
| 1x0cA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 75.0 | 5.40e-01 | 100.0% | 59.4% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 72.0 | 5.57e-01 | 100.0% | 68.0% |
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 70.0 | 5.45e-01 | 100.0% | 72.0% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 70.0 | 5.43e-01 | 100.0% | 65.6% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.75 | 69.0 | 4.68e-01 | 100.0% | 31.5% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.74 | 68.0 | 6.18e-01 | 100.0% | 100.0% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 65.0 | 5.50e-01 | 99.3% | 100.0% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 63.0 | 5.63e-01 | 94.3% | 99.0% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 61.0 | 5.89e-01 | 95.7% | 88.5% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 61.0 | 5.93e-01 | 99.3% | 99.4% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 59.0 | 5.73e-01 | 95.7% | 85.4% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.64 | 44.0 | 5.12e-01 | 87.9% | 100.0% |
| 4dt5A00 | 2.150.10.20 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › | 0.51 | 38.0 | 3.85e-01 | 77.9% | 96.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024598 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.88 | 84.0 | 5.85e-01 | 100.0% | 40.3% |
| 3884895 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.88 | 83.0 | 7.01e-01 | 100.0% | 68.6% |
| 998972 | 207.2.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF2807 | 0.87 | 84.0 | 7.03e-01 | 100.0% | 87.2% |
| 3758283 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.87 | 81.0 | 7.43e-01 | 98.6% | 89.1% |
| 3781698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.87 | 82.0 | 6.38e-01 | 100.0% | 53.1% |
| 4040388 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.85 | 81.0 | 5.51e-01 | 100.0% | 69.3% |
| 4406918 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.85 | 74.0 | 7.67e-01 | 97.1% | 98.5% |
| 3961601 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.85 | 80.0 | 5.47e-01 | 100.0% | 48.0% |
| 5058805 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.85 | 79.0 | 5.37e-01 | 98.6% | 59.1% |
| 3744798 | 208.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 | 0.84 | 68.0 | 6.63e-01 | 100.0% | 78.0% |
| 3254891 | 207.6.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG | 0.84 | 72.0 | 7.38e-01 | 92.9% | 93.3% |
| 3713639 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.84 | 79.0 | 6.37e-01 | 100.0% | 58.0% |
| 4990150 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.84 | 79.0 | 5.63e-01 | 100.0% | 56.5% |
| 3490128 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.83 | 78.0 | 5.01e-01 | 100.0% | 48.1% |
| 3706587 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.83 | 77.0 | 6.20e-01 | 100.0% | 55.8% |
| 3766711 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.81 | 59.0 | 5.04e-01 | 100.0% | 48.4% |
| 3855439 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.80 | 74.0 | 5.82e-01 | 100.0% | 73.0% |
| 4307386 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.79 | 65.0 | 5.86e-01 | 100.0% | 64.9% |
| 3305986 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.79 | 58.0 | 6.31e-01 | 100.0% | 91.3% |
| 3785316 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.79 | 66.0 | 6.79e-01 | 87.9% | 99.2% |
| 3869345 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.78 | 69.0 | 5.83e-01 | 95.0% | 87.1% |
| 7226 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.78 | 72.0 | 5.57e-01 | 100.0% | 68.0% |
| 3606189 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 68.0 | 5.18e-01 | 100.0% | 41.2% |
| 3246091 | 389.1.1.157 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR | 0.78 | 54.0 | 4.98e-01 | 71.4% | 97.2% |
| 4968617 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.77 | 51.0 | 5.87e-01 | 100.0% | 93.0% |
| 3707472 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.76 | 65.0 | 5.31e-01 | 100.0% | 52.1% |
| 3763790 | 208.2.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › SVS_QK | 0.76 | 55.0 | 5.62e-01 | 100.0% | 77.0% |
| 3787858 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.75 | 62.0 | 6.06e-01 | 100.0% | 81.3% |
| 1141999 | 207.2.1.25 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA | 0.75 | 69.0 | 4.68e-01 | 100.0% | 31.5% |
| 4028145 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.75 | 69.0 | 6.66e-01 | 100.0% | 92.2% |
| 3800711 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.74 | 64.0 | 6.30e-01 | 100.0% | 86.7% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.73 | 56.0 | 5.63e-01 | 92.1% | 78.6% |
| 4378528 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.73 | 51.0 | 5.90e-01 | 81.4% | 100.0% |
| 3666410 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.72 | 60.0 | 5.64e-01 | 100.0% | 73.5% |
| 3229795 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.71 | 66.0 | 6.31e-01 | 100.0% | 100.0% |
| 4026564 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.70 | 62.0 | 5.53e-01 | 100.0% | 68.7% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.70 | 51.0 | 5.71e-01 | 82.9% | 100.0% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.68 | 56.0 | 5.46e-01 | 100.0% | 79.4% |