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NC_048757.1__YP_009844929.1__HWC13_gp191__00120

Bact-Vir

NC_048757.1__YP_009844929.1__HWC13_gp191__00120

Identity

Accession:
NC_048757 ↗
Kingdom:
phage

Quality

65.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ravarandavirus› Nodularia_phage_vB_NspS-kac68v161

TaxID: 2557582

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 102-187
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r6bX03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 47.0 4.69e-01 79.1% 72.7%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 45.0 4.62e-01 82.6% 72.9%
6yetA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 48.0 4.71e-01 86.0% 72.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.65 43.0 4.68e-01 77.9% 81.9%
6e1mA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 51.0 4.96e-01 87.2% 81.1%
2f7vA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.63 51.0 3.63e-01 87.2% 98.8%
5e37A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 46.0 4.61e-01 90.7% 77.9%
3smvA02 1.10.150.750 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.62 44.0 4.59e-01 81.4% 83.1%
2hf5A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 40.0 4.42e-01 86.0% 83.8%
6yigA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 46.0 4.59e-01 86.0% 78.4%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.72e-01 98.8% 85.9%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.42e-01 100.0% 77.5%
4l9mA03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 42.0 4.44e-01 89.5% 86.8%
1w5sA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.37e-01 86.0% 85.4%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 4.08e-01 72.1% 80.7%
4c0kA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 49.0 4.70e-01 98.8% 89.1%
3d2yA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.57 43.0 4.37e-01 82.6% 86.9%
6ocxA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 43.0 3.53e-01 88.4% 44.7%
5zorA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 38.0 4.10e-01 86.0% 84.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.30e-01 97.7% 82.4%
6wulB01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 44.0 2.90e-01 86.0% 42.7%
1v66A00 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.55 31.0 3.50e-01 87.2% 72.3%
2pmyA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 33.0 3.53e-01 72.1% 69.9%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.53 38.0 3.00e-01 83.7% 34.6%
2m7lA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 42.0 4.23e-01 95.3% 87.2%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.53 43.0 3.97e-01 93.0% 67.8%
6s9vB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 37.0 2.53e-01 75.6% 92.6%
1vinA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 43.0 3.75e-01 91.9% 64.0%
3gfoA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.21e-01 95.3% 42.6%
4c3iA04 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.52 46.0 3.78e-01 100.0% 83.9%
8e7cA02 1.10.1840.10 Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 0.52 35.0 3.43e-01 90.7% 61.2%
2ahfA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 36.0 2.36e-01 72.1% 50.4%
1gzsB00 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.51 37.0 3.05e-01 77.9% 76.4%
4fzxC00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 40.0 3.33e-01 89.5% 95.2%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 4.20e-01 98.8% 88.9%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026126 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.68 54.0 5.62e-01 86.0% 92.5%
3291218 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 46.0 4.02e-01 80.2% 46.2%
3447599 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.65 51.0 4.71e-01 86.0% 69.6%
3585548 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.65 51.0 4.94e-01 86.0% 75.8%
3941467 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 43.0 4.47e-01 77.9% 73.8%
3596697 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 51.0 4.71e-01 86.0% 77.3%
3223572 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 45.0 4.98e-01 76.7% 98.5%
4026346 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 50.0 4.77e-01 87.2% 73.0%
3274479 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 50.0 4.67e-01 86.0% 68.2%
3198004 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.62 49.0 4.71e-01 86.0% 74.0%
3284686 101.1.9.84 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.62 49.0 3.60e-01 86.0% 97.4%
3589360 101.1.9.27 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1836 0.61 53.0 4.27e-01 100.0% 79.4%
3611775 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 49.0 4.60e-01 87.2% 88.6%
3699740 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 50.0 4.35e-01 91.9% 80.7%
3935349 108.1.1.14 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 0.60 53.0 4.92e-01 100.0% 84.5%
3703848 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 49.0 4.36e-01 91.9% 81.5%
3874257 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 44.0 4.57e-01 88.4% 85.0%
3713972 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.20e-01 87.2% 62.6%
3317469 101.1.2.67 ↗ alpha arrays › HTH › HTH › winged helix domain › HARE-HTH 0.58 46.0 4.50e-01 86.0% 87.4%
4945604 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.57 48.0 3.49e-01 93.0% 44.0%
4153973 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.57 51.0 3.46e-01 100.0% 45.6%
4024222 108.1.1.27 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.57 41.0 4.34e-01 77.9% 88.0%
5071094 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 4.32e-01 89.5% 83.7%
4986510 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 46.0 3.82e-01 98.8% 51.3%
3796334 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 47.0 3.20e-01 93.0% 34.9%
3406914 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.56 46.0 4.33e-01 100.0% 74.3%
4026789 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 43.0 4.17e-01 86.0% 74.0%
3589827 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.55 48.0 3.69e-01 100.0% 58.6%
4025956 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 48.0 3.67e-01 98.8% 91.9%
3353681 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.55 38.0 3.11e-01 73.3% 68.3%
3875839 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.55 48.0 4.38e-01 96.5% 78.3%
3559386 108.1.1.152 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30398 0.54 44.0 4.20e-01 88.4% 78.0%
3801740 108.1.1.36 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_14 0.54 38.0 3.39e-01 73.3% 81.6%
3642800 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.54 47.0 4.28e-01 96.5% 80.7%
3870047 108.1.1.152 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30398 0.54 42.0 3.49e-01 86.0% 89.4%
3793602 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 44.0 3.14e-01 93.0% 38.9%
3742315 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 44.0 4.11e-01 93.0% 96.4%
3689575 108.1.1.46 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin 0.53 44.0 3.38e-01 95.3% 70.5%
3712639 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 37.0 3.83e-01 88.4% 80.0%
3653057 108.1.1.46 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin 0.52 44.0 3.36e-01 96.5% 70.2%
3592133 4959.1.1.1 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.52 46.0 3.61e-01 100.0% 85.8%
3254841 101.1.2.198 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.52 46.0 4.36e-01 98.8% 82.9%
None — 0.52 43.0 3.13e-01 94.2% 40.0%
4002772 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 4.31e-01 96.5% 83.0%
3278434 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.52 43.0 3.10e-01 95.3% 38.2%
3502270 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.51 40.0 3.33e-01 89.5% 92.9%
3004998 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.50 41.0 4.16e-01 98.8% 91.8%
D2 high residues 220-308
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 55.0 4.05e-01 83.1% 35.0%
2ys8A00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.68 49.0 4.97e-01 75.3% 78.9%
3swhA01 1.10.357.50 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.67 53.0 4.40e-01 86.5% 70.9%
1x5bA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 49.0 4.33e-01 78.7% 54.1%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.64 47.0 4.29e-01 75.3% 85.7%
2ibdA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 54.0 4.64e-01 98.9% 87.1%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 46.0 3.96e-01 80.9% 67.8%
4lqkA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.59 46.0 4.10e-01 85.4% 59.1%
6tblB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 44.0 4.12e-01 82.0% 64.0%
2ctqA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.58 43.0 4.28e-01 79.8% 80.9%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 40.0 3.91e-01 71.9% 84.5%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 40.0 3.71e-01 71.9% 84.5%
3w1oA00 3.40.1760.20 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › 0.57 38.0 3.51e-01 95.5% 53.0%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.57 41.0 4.12e-01 77.5% 75.5%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.57 41.0 3.98e-01 76.4% 77.8%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 39.0 3.68e-01 79.8% 58.9%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.57 40.0 3.68e-01 74.2% 78.6%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.56 43.0 3.83e-01 82.0% 87.4%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.56 39.0 3.83e-01 74.2% 89.8%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 41.0 3.82e-01 77.5% 88.1%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 39.0 3.78e-01 74.2% 91.2%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 39.0 3.75e-01 75.3% 86.0%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 42.0 4.04e-01 85.4% 89.9%
2m6bA00 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.55 42.0 3.64e-01 84.3% 88.7%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 38.0 3.76e-01 74.2% 90.8%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 37.0 3.85e-01 71.9% 92.9%
3mnlB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 44.0 3.67e-01 95.5% 86.8%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 38.0 3.09e-01 75.3% 70.5%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 39.0 3.44e-01 82.0% 52.6%
2yveB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 45.0 3.75e-01 100.0% 89.0%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 34.0 3.87e-01 96.6% 96.7%
2i71A02 1.10.3740.10 Mainly Alpha › Orthogonal Bundle › SSO1389-like fold › SSO1389-like domains 0.51 41.0 3.50e-01 87.6% 98.0%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 39.0 3.25e-01 80.9% 90.8%
3c7jA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.51 36.0 3.09e-01 74.2% 90.4%
3ihuA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.51 38.0 3.33e-01 80.9% 89.2%
2q14B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.50 40.0 3.05e-01 88.8% 61.4%
2vxgA02 1.10.220.100 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 0.50 38.0 3.87e-01 82.0% 98.8%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3857799 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.70 50.0 4.79e-01 75.3% 70.5%
3711198 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.69 52.0 5.37e-01 79.8% 85.9%
3728950 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.67 47.0 5.12e-01 73.0% 92.0%
3335438 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.67 53.0 5.18e-01 84.3% 100.0%
3251141 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.67 46.0 4.36e-01 70.8% 72.4%
3405579 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.66 52.0 4.91e-01 85.4% 78.2%
3823459 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.66 52.0 4.46e-01 84.3% 66.4%
3720075 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 50.0 3.60e-01 82.0% 27.4%
3304338 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.66 51.0 4.57e-01 83.1% 69.6%
3296891 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.66 54.0 4.35e-01 88.8% 80.0%
3806318 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.65 53.0 5.15e-01 88.8% 100.0%
3679230 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.65 51.0 4.79e-01 84.3% 81.8%
3667265 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.65 54.0 4.56e-01 89.9% 96.6%
4008051 3855.1.1.0 ↗ alpha arrays › Serum amyloid A-1 protein › Serum amyloid A-1 protein › Serum amyloid A-1 protein 0.65 56.0 4.90e-01 96.6% 97.0%
3248611 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 52.0 5.31e-01 86.5% 94.1%
3727138 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 51.0 5.07e-01 86.5% 84.2%
3662244 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 52.0 4.60e-01 87.6% 68.5%
3332264 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.64 51.0 4.50e-01 87.6% 69.6%
3598382 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.63 52.0 4.82e-01 89.9% 70.4%
3820448 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.63 51.0 4.38e-01 86.5% 65.0%
4927274 604.5.1.1 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.62 49.0 3.73e-01 85.4% 70.5%
3595902 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.61 42.0 3.25e-01 70.8% 87.5%
3645559 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.61 42.0 4.28e-01 73.0% 81.1%
5032558 604.5.1.1 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.59 46.0 3.56e-01 84.3% 68.9%
3378525 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.59 42.0 4.01e-01 74.2% 68.6%
5073872 604.5.1.1 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.59 47.0 3.56e-01 86.5% 77.2%
3378097 604.1.1.110 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › WIT1_2_N 0.58 41.0 3.72e-01 74.2% 84.2%
3651618 109.4.1.425 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF707 0.57 44.0 3.36e-01 82.0% 36.2%
3488291 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 39.0 3.71e-01 73.0% 89.5%
5075237 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.56 39.0 4.04e-01 89.9% 77.6%
4933622 604.5.1.2 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.55 38.0 3.75e-01 73.0% 86.0%
3260422 109.4.1.1255 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.55 47.0 3.08e-01 100.0% 20.0%
3736709 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.55 41.0 3.21e-01 83.1% 90.5%
5025005 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 45.0 3.46e-01 89.9% 99.0%
3479969 109.4.1.584 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_C 0.54 40.0 3.49e-01 79.8% 51.1%
4029405 109.4.1.584 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_C 0.53 38.0 3.33e-01 83.1% 48.6%
3682747 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 2.90e-01 82.0% 65.2%
5022337 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 40.0 3.90e-01 84.3% 85.0%
D3 medium residues 1-101_188-215
PDB