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NC_048767.1__YP_009845981.1__HWC23_gp47__00047
Bact-VirNC_048767.1__YP_009845981.1__HWC23_gp47__00047
Identity
- Accession:
- NC_048767 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2588094
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-124
Domain cluster:
rep: CAKLQF020000010.1__CAH1085041.1__SAMEA5780031_02143__00088__D216-325
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12833.14 best | HTH_18 | 50.4 | 3.00e-13 | 65.8% | 95.0% |
| PF00165.30 | HTH_AraC | 35.3 | 1.30e-08 | 35.8% | 88.1% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fe7A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.91 | 75.0 | 7.92e-01 | 87.5% | 94.5% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.89 | 75.0 | 7.78e-01 | 88.3% | 93.8% |
| 6xiuA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 70.0 | 7.59e-01 | 85.0% | 99.0% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 69.0 | 7.41e-01 | 85.8% | 96.2% |
| 3w6vA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 71.0 | 7.35e-01 | 89.2% | 97.3% |
| 2k9sA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 67.0 | 7.10e-01 | 84.2% | 98.1% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 62.0 | 6.47e-01 | 86.7% | 97.2% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.69 | 42.0 | 4.73e-01 | 99.2% | 78.7% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.37e-01 | 85.0% | 71.0% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 49.0 | 4.23e-01 | 86.7% | 66.1% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 49.0 | 4.39e-01 | 87.5% | 74.0% |
| 4hkuB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 48.0 | 4.33e-01 | 87.5% | 73.4% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 46.0 | 4.07e-01 | 84.2% | 68.3% |
| 2d6yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 4.11e-01 | 86.7% | 65.1% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 4.20e-01 | 85.8% | 68.0% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.99e-01 | 89.2% | 64.2% |
| 3ppbA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 46.0 | 3.99e-01 | 84.2% | 66.0% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 47.0 | 4.09e-01 | 88.3% | 67.5% |
| 2g7gA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 45.0 | 3.90e-01 | 84.2% | 57.9% |
| 2yveB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 44.0 | 4.01e-01 | 84.2% | 68.6% |
| 3nrvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 3.90e-01 | 95.8% | 65.9% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.74e-01 | 87.5% | 59.6% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 4.07e-01 | 86.7% | 79.5% |
| 2a61B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.82e-01 | 80.8% | 66.4% |
| 3qkxB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 43.0 | 3.82e-01 | 86.7% | 68.0% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.76e-01 | 82.5% | 70.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964790 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.91 | 72.0 | 7.74e-01 | 84.2% | 94.3% |
| 3972891 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.88 | 70.0 | 7.62e-01 | 84.2% | 98.0% |
| None | — | 0.88 | 71.0 | 7.74e-01 | 85.8% | 100.0% | |
| 3981026 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.88 | 72.0 | 7.70e-01 | 85.8% | 97.1% |
| 4010677 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.88 | 71.0 | 7.78e-01 | 83.3% | 100.0% |
| 3944639 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.88 | 72.0 | 7.71e-01 | 86.7% | 98.1% |
| 4004617 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.87 | 72.0 | 7.43e-01 | 87.5% | 92.2% |
| 3968456 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.86 | 72.0 | 7.56e-01 | 88.3% | 96.3% |
| 4497103 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.86 | 69.0 | 7.38e-01 | 85.0% | 96.2% |
| 3949057 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.85 | 69.0 | 7.36e-01 | 85.0% | 97.1% |
| 3956897 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.85 | 69.0 | 7.39e-01 | 86.7% | 97.1% |
| None | — | 0.85 | 67.0 | 7.36e-01 | 83.3% | 99.0% | |
| None | — | 0.85 | 66.0 | 7.24e-01 | 82.5% | 98.0% | |
| 4193366 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.84 | 68.0 | 7.14e-01 | 85.8% | 91.8% |
| 3973662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 66.0 | 7.18e-01 | 82.5% | 98.0% |
| 3976262 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.84 | 70.0 | 7.14e-01 | 87.5% | 91.3% |
| 3968254 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.84 | 61.0 | 6.85e-01 | 77.5% | 95.8% |
| 3513766 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.84 | 76.0 | 7.47e-01 | 100.0% | 92.0% |
| 3976759 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.83 | 65.0 | 7.02e-01 | 81.7% | 97.0% |
| 4107953 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.83 | 69.0 | 6.96e-01 | 87.5% | 90.0% |
| 3964894 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.83 | 64.0 | 6.91e-01 | 81.7% | 96.0% |
| 4009674 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.82 | 69.0 | 7.17e-01 | 88.3% | 95.5% |
| 3945925 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.82 | 63.0 | 6.88e-01 | 82.5% | 97.0% |
| 3283340 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.82 | 63.0 | 6.60e-01 | 81.7% | 88.2% |
| 3945505 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.81 | 72.0 | 7.27e-01 | 100.0% | 95.0% |
| 4590066 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.81 | 68.0 | 7.03e-01 | 90.8% | 93.8% |
| 4211867 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.81 | 68.0 | 7.06e-01 | 88.3% | 96.4% |
| 4374806 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.81 | 69.0 | 5.90e-01 | 90.0% | 94.6% |
| 3975658 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.80 | 54.0 | 6.17e-01 | 74.2% | 93.3% |
| 4379469 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 39.0 | 5.38e-01 | 81.7% | 95.0% |
| 3979732 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 43.0 | 5.71e-01 | 83.3% | 100.0% |
| 4539758 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.77 | 61.0 | 6.17e-01 | 84.2% | 86.7% |
| 3588151 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 41.0 | 5.48e-01 | 79.2% | 98.5% |
| 4606821 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.71 | 44.0 | 4.78e-01 | 99.2% | 74.0% |
| 3788384 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 46.0 | 4.88e-01 | 89.2% | 73.4% |
| 4281674 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.69 | 43.0 | 4.60e-01 | 99.2% | 71.4% |
| 4938759 | 101.1.8.14 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 | 0.69 | 34.0 | 4.64e-01 | 77.5% | 100.0% |
| 4266587 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.69 | 43.0 | 4.73e-01 | 100.0% | 77.9% |
| 4081576 | 101.1.6.1 ↗ | alpha arrays › HTH › HTH › TrpR › Trp_repressor | 0.66 | 39.0 | 4.34e-01 | 90.8% | 72.6% |
| 3870199 | 109.24.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A, DOCK_C-D_N | 0.54 | 42.0 | 2.61e-01 | 82.5% | 18.8% |