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NC_048772.1__YP_009846828.1__HWC28_gp029__00029
Bact-VirNC_048772.1__YP_009846828.1__HWC28_gp029__00029
Identity
- Accession:
- NC_048772 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Taxonomy
TaxID: 2588520
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-65
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.63 | 43.0 | 3.99e-01 | 96.2% | 53.5% |
| 3hi7B02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 47.0 | 3.64e-01 | 98.1% | 34.4% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.61 | 44.0 | 3.55e-01 | 94.2% | 35.9% |
| 2rloA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 43.0 | 3.34e-01 | 98.1% | 31.2% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.60 | 45.0 | 3.62e-01 | 100.0% | 40.0% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 3.41e-01 | 100.0% | 33.6% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.58 | 40.0 | 3.96e-01 | 96.2% | 68.4% |
| 1nhpA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.57 | 43.0 | 3.44e-01 | 100.0% | 38.9% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.57 | 42.0 | 3.46e-01 | 98.1% | 39.8% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.56 | 39.0 | 3.73e-01 | 100.0% | 61.5% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 41.0 | 3.04e-01 | 100.0% | 29.8% |
| 3irbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 3.67e-01 | 92.3% | 61.8% |
| 4j7rA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 40.0 | 2.44e-01 | 90.4% | 20.8% |
| 3ro6C01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 3.55e-01 | 100.0% | 46.2% |
| 6zj8D01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 40.0 | 3.27e-01 | 100.0% | 39.5% |
| 4bqqB02 | 3.90.1750.20 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 | 0.53 | 40.0 | 2.78e-01 | 82.7% | 50.0% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 37.0 | 2.95e-01 | 96.2% | 32.0% |
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.53 | 43.0 | 2.85e-01 | 100.0% | 23.2% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.52 | 35.0 | 2.77e-01 | 98.1% | 29.4% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 41.0 | 3.36e-01 | 100.0% | 45.9% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.51 | 40.0 | 2.87e-01 | 98.1% | 33.3% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.50 | 35.0 | 3.37e-01 | 98.1% | 62.5% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 42.0 | 2.95e-01 | 100.0% | 59.0% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 40.0 | 3.11e-01 | 100.0% | 53.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 349159 | 913.1.1.1 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › HRM | 0.66 | 49.0 | 4.33e-01 | 96.2% | 53.8% |
| 3255612 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.64 | 43.0 | 2.64e-01 | 96.2% | 10.7% |
| 4629047 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.62 | 42.0 | 2.59e-01 | 96.2% | 10.6% |
| 3295440 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 49.0 | 3.54e-01 | 98.1% | 29.1% |
| 3264986 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.61 | 46.0 | 3.71e-01 | 98.1% | 40.0% |
| 139759 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 44.0 | 3.53e-01 | 100.0% | 37.2% |
| 3898198 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.59 | 43.0 | 3.40e-01 | 98.1% | 34.4% |
| 4960997 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.59 | 43.0 | 3.99e-01 | 100.0% | 60.0% |
| 3378739 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.58 | 45.0 | 3.91e-01 | 98.1% | 54.2% |
| 4932428 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 41.0 | 3.86e-01 | 100.0% | 60.0% |
| 3986557 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.58 | 45.0 | 3.57e-01 | 100.0% | 40.0% |
| 3278705 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.57 | 41.0 | 3.07e-01 | 98.1% | 28.0% |
| 3268767 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 37.0 | 3.09e-01 | 98.1% | 33.6% |
| 3609745 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 40.0 | 3.21e-01 | 100.0% | 34.4% |
| 3742122 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 2.85e-01 | 100.0% | 23.6% |
| 3912902 | 233.1.1.3 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha | 0.55 | 33.0 | 2.89e-01 | 100.0% | 35.3% |
| 4497101 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.55 | 41.0 | 3.62e-01 | 96.2% | 51.7% |
| 3931469 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 43.0 | 2.79e-01 | 100.0% | 28.6% |
| 3942790 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.54 | 37.0 | 3.58e-01 | 90.4% | 60.0% |
| 3251426 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.54 | 44.0 | 3.99e-01 | 96.2% | 72.0% |
| 395916 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.54 | 45.0 | 3.37e-01 | 100.0% | 39.0% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.54 | 39.0 | 2.81e-01 | 84.6% | 28.6% |
| 5029482 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.53 | 40.0 | 3.65e-01 | 94.2% | 58.7% |
| 3956733 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.53 | 40.0 | 2.61e-01 | 100.0% | 15.9% |
| 3212189 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 40.0 | 3.21e-01 | 96.2% | 39.1% |
| 4945115 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.53 | 34.0 | 2.61e-01 | 94.2% | 26.2% |
| 3771406 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.15e-01 | 100.0% | 36.8% |
| 4771028 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.52 | 37.0 | 3.57e-01 | 98.1% | 63.5% |
| 3418267 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.52 | 41.0 | 3.35e-01 | 98.1% | 64.2% |
| 3590178 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.52 | 41.0 | 2.65e-01 | 100.0% | 16.6% |
| 4982570 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.52 | 37.0 | 3.52e-01 | 100.0% | 60.0% |
| 3686624 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 43.0 | 3.38e-01 | 100.0% | 68.0% |
| 3787862 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.51 | 38.0 | 3.08e-01 | 86.5% | 60.0% |
| 3788285 | 395.1.1.4 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › Flocculin_t3 | 0.51 | 38.0 | 3.90e-01 | 96.2% | 98.0% |
| 4991405 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 41.0 | 2.54e-01 | 100.0% | 78.2% |
| 3645375 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.51 | 34.0 | 2.98e-01 | 90.4% | 40.4% |
| 3782244 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.51 | 36.0 | 3.06e-01 | 100.0% | 41.0% |
| 3621626 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.50 | 42.0 | 2.59e-01 | 98.1% | 21.4% |
| 3799677 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.50 | 40.0 | 2.62e-01 | 96.2% | 23.6% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.50 | 38.0 | 3.02e-01 | 92.3% | 47.7% |
| 3218749 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.50 | 36.0 | 3.54e-01 | 90.4% | 71.7% |