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NC_048772.1__YP_009846904.1__HWC28_gp105__00105

Bact-Vir

NC_048772.1__YP_009846904.1__HWC28_gp105__00105

Identity

Accession:
NC_048772 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Plateaulakevirus› Aeromonas_phage_4L372XY

TaxID: 2588520

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-121
PDB
Domain cluster: rep: NC_027981.1__YP_009167713.1__APL38_gp06__00006__D10-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26074.1 best Phage_DEC_PhiTE 87.1 1.70e-24 100.0% 78.7%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1c5eA00 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.76 65.0 6.76e-01 100.0% 98.9%
6xgqb01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.71 60.0 6.29e-01 92.2% 100.0%
1ueqA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 39.0 3.73e-01 75.7% 78.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2559744 70.4.1.2 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr 0.74 42.0 5.43e-01 91.3% 98.3%
2640772 70.4.1.1 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD 0.71 61.0 6.26e-01 100.0% 96.0%
715 7.1.1.1 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.54 39.0 3.73e-01 75.7% 78.0%
141134 7.1.1.1 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.53 44.0 4.08e-01 90.3% 89.1%
3669715 1.1.16.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.50 37.0 3.15e-01 84.5% 47.1%