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NC_048788.1__YP_009848842.1__HWC44_gp023__00023
Bact-VirNC_048788.1__YP_009848842.1__HWC44_gp023__00023
Identity
- Accession:
- NC_048788 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Taxonomy
TaxID: 2588513
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-10_72-95_123-147
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fb2A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.62 | 53.0 | 3.28e-01 | 100.0% | 70.2% |
| 2ve3B00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 52.0 | 3.19e-01 | 100.0% | 70.5% |
| 3daxB00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 50.0 | 2.97e-01 | 100.0% | 68.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012056 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.62 | 52.0 | 3.04e-01 | 100.0% | 61.8% |
| 3484153 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 39.0 | 2.23e-01 | 100.0% | 6.2% |
D2
medium
residues 11-71_96-122
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.72 | 30.0 | 3.00e-01 | 79.5% | 37.0% |
| 4n6rB00 | 2.60.40.3960 | Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain | 0.55 | 47.0 | 3.68e-01 | 96.6% | 84.3% |
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.53 | 38.0 | 3.91e-01 | 76.1% | 80.5% |
| 4ye4H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 44.0 | 3.93e-01 | 96.6% | 96.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1549209 | 264.1.1.2 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › Corona_NS2A | 0.56 | 40.0 | 3.35e-01 | 73.9% | 96.5% |
| 5783 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.56 | 34.0 | 3.41e-01 | 80.7% | 59.6% |
| 5028273 | 11.18.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in metallo-endopeptidase BACOVA_00663 › N-terminal domain in metallo-endopeptidase BACOVA_00663 | 0.52 | 41.0 | 3.94e-01 | 83.0% | 85.0% |
| 4024820 | 898.1.1.0 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 | 0.51 | 44.0 | 3.73e-01 | 97.7% | 92.7% |