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NC_048789.1__YP_009848969.1__HWC45_gp44__00044
Bact-VirNC_048789.1__YP_009848969.1__HWC45_gp44__00044
Identity
- Accession:
- NC_048789 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 2588504
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-106
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 39.0 | 4.32e-01 | 71.0% | 69.3% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.56 | 43.0 | 3.70e-01 | 82.8% | 60.4% |
| 6u8yK01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.55 | 42.0 | 3.57e-01 | 81.7% | 59.1% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.53 | 41.0 | 3.81e-01 | 82.8% | 73.3% |
| 3gm5A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 37.0 | 3.18e-01 | 71.0% | 55.0% |
| 4qclA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 36.0 | 3.78e-01 | 72.0% | 93.0% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.52 | 39.0 | 3.44e-01 | 79.6% | 73.0% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 37.0 | 3.11e-01 | 75.3% | 56.6% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.51 | 29.0 | 2.39e-01 | 72.0% | 26.7% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 3.08e-01 | 93.5% | 83.8% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.50 | 36.0 | 3.31e-01 | 91.4% | 56.1% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 38.0 | 3.54e-01 | 79.6% | 75.9% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.50 | 32.0 | 3.11e-01 | 97.8% | 55.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2168051 | 2.1.1.32 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 | 0.59 | 35.0 | 3.71e-01 | 75.3% | 65.1% |
| 4971784 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.56 | 43.0 | 4.59e-01 | 81.7% | 98.8% |
| 4946576 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.56 | 42.0 | 3.48e-01 | 81.7% | 51.7% |
| 4205144 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 42.0 | 3.55e-01 | 81.7% | 58.1% |
| 3709133 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 40.0 | 3.80e-01 | 80.6% | 100.0% |
| 4082864 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 44.0 | 4.23e-01 | 87.1% | 87.6% |
| 3803728 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.54 | 39.0 | 3.33e-01 | 75.3% | 58.2% |
| 3279407 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 36.0 | 3.47e-01 | 76.3% | 58.2% |
| 4316603 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.54 | 40.0 | 4.28e-01 | 82.8% | 98.7% |
| 3506907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 3.75e-01 | 74.2% | 69.0% |
| 5041730 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.54 | 41.0 | 3.54e-01 | 80.6% | 58.6% |
| 4977528 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 40.0 | 3.58e-01 | 81.7% | 65.9% |
| 4943930 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 40.0 | 3.45e-01 | 81.7% | 61.3% |
| 3723171 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 37.0 | 3.20e-01 | 74.2% | 76.0% |
| 3525299 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.51 | 35.0 | 2.29e-01 | 71.0% | 62.2% |
| 3937109 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 34.0 | 2.40e-01 | 71.0% | 20.0% |
| 3301049 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 38.0 | 3.50e-01 | 78.5% | 82.5% |
| 5076766 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.51 | 40.0 | 4.05e-01 | 86.0% | 98.9% |