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NC_048791.1__YP_009849057.1__HWC47_gp18__00018

Bact-Vir

NC_048791.1__YP_009849057.1__HWC47_gp18__00018

Identity

Accession:
NC_048791 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-82
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10910.15 best Phage_gene29 63.3 3.50e-17 100.0% 60.5%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 49.0 4.04e-01 100.0% 83.8%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 3.95e-01 100.0% 83.6%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 45.0 3.91e-01 97.4% 87.5%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 4.09e-01 93.5% 89.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255051 3018.1.1.0 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.52 37.0 3.36e-01 74.0% 98.1%
D2 medium residues 94-123
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4axhA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.60 49.0 3.34e-01 100.0% 22.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3399226 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.87 63.0 3.39e-01 76.7% 4.6%