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NC_048792.1__YP_009849148.1__HWC48_gp052__00052

Bact-Vir

NC_048792.1__YP_009849148.1__HWC48_gp052__00052

Identity

Accession:
NC_048792 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Moabitevirus› Serratia_phage_Moabite

TaxID: 2587814

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 54.0 6.43e-01 71.2% 93.3%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.80 57.0 4.89e-01 74.2% 49.5%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 5.83e-01 75.8% 80.3%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 56.0 6.25e-01 75.8% 94.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.80 65.0 5.18e-01 87.9% 70.6%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.79 55.0 4.63e-01 75.8% 44.0%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 5.32e-01 72.7% 70.1%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.74 60.0 6.01e-01 87.9% 92.6%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.74 56.0 4.89e-01 86.4% 52.9%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 58.0 5.56e-01 86.4% 84.6%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.74 57.0 5.77e-01 87.9% 86.2%
3b81A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 49.0 3.57e-01 72.7% 33.9%
2wwxB00 1.20.1260.70 Mainly Alpha › Up-down Bundle › Ferritin › 0.71 57.0 3.97e-01 86.4% 58.0%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 55.0 5.71e-01 86.4% 96.7%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.09e-01 81.8% 65.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.87e-01 74.2% 87.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.06e-01 71.2% 59.2%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 44.0 4.27e-01 77.3% 68.0%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.79e-01 71.2% 53.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.43e-01 77.3% 37.1%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 44.0 4.42e-01 86.4% 77.1%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.87e-01 74.2% 100.0%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 39.0 3.57e-01 78.8% 48.9%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 46.0 3.26e-01 98.5% 29.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.64e-01 87.9% 49.6%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 41.0 3.86e-01 78.8% 98.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.69e-01 77.3% 98.6%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4311605 101.1.13.0 ↗ alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD 0.95 70.0 7.69e-01 77.3% 94.5%
4534027 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.95 70.0 7.69e-01 77.3% 94.5%
3278040 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 67.0 7.01e-01 75.8% 85.0%
4334657 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 60.0 7.23e-01 74.2% 100.0%
4198219 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 60.0 7.23e-01 74.2% 100.0%
5018585 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 60.0 6.60e-01 75.8% 85.5%
4008959 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.87 68.0 7.40e-01 83.3% 100.0%
5070354 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 63.0 5.85e-01 77.3% 66.3%
3234222 101.1.1.54 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_1 0.83 57.0 6.20e-01 75.8% 85.5%
4964802 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 57.0 5.99e-01 72.7% 83.3%
4173484 148.1.2.1 ↗ alpha arrays › Histone-like › Histone-related › double Clp-N › Clp_N 0.82 73.0 4.97e-01 97.0% 70.0%
3879118 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 59.0 6.46e-01 75.8% 94.5%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.81 62.0 5.35e-01 83.3% 54.0%
3986842 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 5.95e-01 78.8% 98.6%
3789627 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 57.0 5.82e-01 74.2% 78.5%
3590885 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 5.69e-01 75.8% 77.1%
4998605 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.80 60.0 4.96e-01 78.8% 74.5%
4952807 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.80 70.0 6.66e-01 93.9% 85.3%
235968 138.1.1.9 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.80 65.0 5.19e-01 87.9% 71.2%
3753093 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 57.0 5.74e-01 74.2% 93.8%
5080109 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.79 55.0 5.34e-01 74.2% 70.7%
3718418 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 4.89e-01 71.2% 68.2%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 53.0 5.50e-01 71.2% 88.3%
5006645 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 55.0 5.78e-01 75.8% 86.7%
4939690 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.76 60.0 5.11e-01 83.3% 68.0%
4010017 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.75 59.0 5.82e-01 84.8% 95.7%
3166400 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.72 56.0 5.64e-01 83.3% 90.8%
3286340 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 48.0 4.25e-01 71.2% 48.4%
3920862 101.1.1.221 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.71 48.0 5.40e-01 74.2% 94.0%
4466704 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 48.0 4.13e-01 71.2% 45.0%
4486944 7565.1.1.0 ↗ a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.70 57.0 4.06e-01 86.4% 31.7%
3962033 2498.1.1.29 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.69 48.0 4.06e-01 71.2% 46.7%
3286796 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.69 46.0 4.10e-01 71.2% 47.4%
4855198 101.1.13.1 ↗ alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › FlhD 0.69 52.0 5.23e-01 89.4% 83.1%
3933366 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.66 50.0 4.92e-01 80.3% 87.1%
3961692 101.1.1.300 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.65 45.0 4.02e-01 78.8% 50.5%
3944389 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.61 41.0 3.85e-01 72.7% 54.1%