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NC_048792.1__YP_009849210.1__HWC48_gp300__00114

Bact-Vir

NC_048792.1__YP_009849210.1__HWC48_gp300__00114

Identity

Accession:
NC_048792 ↗
Kingdom:
phage

Quality

71.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Moabitevirus› Serratia_phage_Moabite

TaxID: 2587814

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-150
PDB
D2 medium residues 151-194_299-315_393-411
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.56 44.0 3.40e-01 82.5% 73.2%
2wauA02 1.20.58.830 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 38.0 3.25e-01 100.0% 45.1%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.54 41.0 3.40e-01 100.0% 45.5%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.53 46.0 3.54e-01 100.0% 79.4%
3vnaA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 37.0 3.08e-01 78.8% 66.2%
3l86A00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.51 36.0 2.60e-01 98.8% 24.5%
4eacC01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.51 40.0 2.82e-01 87.5% 55.9%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 43.0 3.54e-01 96.2% 70.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2325673 5057.1.1.1 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb 0.60 36.0 3.09e-01 98.8% 38.5%
3251262 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.60 43.0 3.07e-01 77.5% 37.3%
3994910 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.58 49.0 3.94e-01 91.3% 83.3%
3274439 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 42.0 3.08e-01 78.8% 42.7%
3259203 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 42.0 2.75e-01 78.8% 25.9%
3259543 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 41.0 2.94e-01 75.0% 40.0%
3276734 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 42.0 2.87e-01 78.8% 32.3%
3179895 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.57 39.0 3.22e-01 72.5% 59.5%
3274275 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.55 40.0 2.52e-01 78.8% 19.8%
5000806 251.1.1.1 ↗ a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS 0.54 39.0 3.46e-01 75.0% 93.0%
3248673 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 38.0 2.95e-01 75.0% 36.7%
3276792 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 36.0 3.07e-01 71.2% 43.0%
3250526 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.52 38.0 2.85e-01 78.8% 37.3%
3285434 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 44.0 3.69e-01 95.0% 100.0%
D3 medium residues 195-298_316-392
PDB