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NC_048792.1__YP_009849323.1__HWC48_gp187__00227

Bact-Vir

NC_048792.1__YP_009849323.1__HWC48_gp187__00227

Identity

Accession:
NC_048792 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Moabitevirus› Serratia_phage_Moabite

TaxID: 2587814

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-97_109-130
PDB
Domain cluster: rep: FQ482085.1__CBX44565.1__P88_00540__00054__D2-83
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uc8A03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 38.0 3.88e-01 100.0% 61.7%
5oomJ01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.57 37.0 4.24e-01 98.9% 95.5%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 4.00e-01 97.9% 83.7%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.74e-01 97.9% 84.8%
4an6B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 43.0 3.60e-01 95.8% 87.7%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 37.0 4.01e-01 97.9% 92.6%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058682 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 61.0 5.39e-01 100.0% 81.4%
4662972 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.68 61.0 5.51e-01 100.0% 90.0%
3963810 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 61.0 5.34e-01 100.0% 84.3%
4220105 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.66 60.0 5.11e-01 100.0% 78.0%
3649449 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.62 55.0 5.09e-01 100.0% 80.0%
3650852 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 55.0 5.13e-01 100.0% 81.7%
3827010 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 54.0 5.41e-01 100.0% 98.9%
3460772 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.61 53.0 4.91e-01 100.0% 77.6%
4646733 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.60 52.0 5.21e-01 100.0% 97.0%
3806927 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.60 51.0 5.16e-01 98.9% 97.9%
3546736 389.1.2.1 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.59 29.0 3.60e-01 98.9% 75.0%
3706674 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 41.0 3.78e-01 77.9% 76.0%
3715600 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 32.0 2.06e-01 100.0% 11.2%
3837861 6.1.1.2 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume 0.53 45.0 3.70e-01 95.8% 86.7%
3777502 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 4.39e-01 100.0% 94.4%
3555992 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 43.0 4.43e-01 100.0% 95.6%
3631256 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.52 36.0 2.43e-01 71.6% 92.3%
4838855 304.109.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN 0.51 39.0 3.60e-01 100.0% 64.5%
5000395 304.109.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.50 38.0 3.88e-01 100.0% 82.8%
4118973 1.1.5.26 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.50 34.0 3.22e-01 70.5% 60.0%
5010878 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 43.0 4.05e-01 94.7% 82.6%