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NC_048792.1__YP_009849409.1__HWC48_gp101__00313
Bact-VirNC_048792.1__YP_009849409.1__HWC48_gp101__00313
Identity
- Accession:
- NC_048792 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 2587814
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 25-74
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27224.1 best | YfjT | 36.0 | 1.10e-08 | 100.0% | 42.6% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.76 | 65.0 | 4.78e-01 | 96.0% | 44.7% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.76 | 65.0 | 4.06e-01 | 96.0% | 70.9% |
| 2gc9B00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.74 | 64.0 | 4.47e-01 | 98.0% | 62.7% |
| 2iayA00 | 3.30.1820.10 | Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like | 0.74 | 57.0 | 4.47e-01 | 88.0% | 45.6% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.74 | 67.0 | 5.20e-01 | 100.0% | 53.8% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.73 | 63.0 | 4.36e-01 | 100.0% | 59.2% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.72 | 65.0 | 4.65e-01 | 100.0% | 52.2% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.72 | 58.0 | 4.23e-01 | 90.0% | 82.9% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.72 | 59.0 | 4.90e-01 | 92.0% | 55.6% |
| 7lxuE01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.71 | 61.0 | 3.95e-01 | 94.0% | 43.9% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 55.0 | 4.66e-01 | 86.0% | 64.4% |
| 8f66A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.71 | 60.0 | 3.92e-01 | 94.0% | 44.8% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 59.0 | 4.23e-01 | 98.0% | 36.4% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.70 | 59.0 | 3.83e-01 | 94.0% | 40.5% |
| 1wthA02 | 3.10.450.190 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 58.0 | 4.71e-01 | 98.0% | 94.1% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 4.55e-01 | 78.0% | 74.2% |
| 3dgtA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 59.0 | 3.71e-01 | 100.0% | 67.3% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 57.0 | 3.67e-01 | 94.0% | 80.4% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.67 | 56.0 | 3.90e-01 | 94.0% | 49.7% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.67 | 57.0 | 3.56e-01 | 100.0% | 62.9% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 3.50e-01 | 100.0% | 38.1% |
| 7o0eA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 49.0 | 4.14e-01 | 78.0% | 100.0% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.64 | 53.0 | 4.10e-01 | 94.0% | 70.1% |
| 5iz3A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.64 | 54.0 | 3.78e-01 | 100.0% | 33.9% |
| 3i9v700 | 3.30.920.80 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 | 0.64 | 55.0 | 4.16e-01 | 100.0% | 56.7% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 54.0 | 4.06e-01 | 100.0% | 74.4% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 53.0 | 3.36e-01 | 100.0% | 53.4% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.62 | 51.0 | 4.45e-01 | 94.0% | 67.5% |
| 3uqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 49.0 | 4.04e-01 | 92.0% | 95.7% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 50.0 | 3.09e-01 | 100.0% | 72.3% |
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.59 | 42.0 | 3.22e-01 | 78.0% | 62.9% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.59 | 47.0 | 3.98e-01 | 100.0% | 62.6% |
| 3zh8C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 45.0 | 3.55e-01 | 86.0% | 93.9% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 4.09e-01 | 92.0% | 83.3% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 39.0 | 3.72e-01 | 88.0% | 68.8% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 39.0 | 3.19e-01 | 90.0% | 68.5% |
| 1r6vA01 | 2.60.40.1800 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.25e-01 | 100.0% | 80.8% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008896 | 11.1.1.1286 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27224 | 0.86 | 77.0 | 5.67e-01 | 100.0% | 45.6% |
| 4342741 | 243.19.1.3 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N | 0.84 | 72.0 | 5.98e-01 | 94.0% | 72.9% |
| 5026930 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.82 | 62.0 | 4.26e-01 | 82.0% | 57.1% |
| 5015593 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.79 | 67.0 | 5.04e-01 | 94.0% | 44.2% |
| 3987038 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.79 | 65.0 | 4.77e-01 | 88.0% | 40.8% |
| 3261416 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.79 | 70.0 | 5.07e-01 | 100.0% | 66.4% |
| 4410826 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.79 | 63.0 | 4.29e-01 | 88.0% | 58.4% |
| 4948037 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.79 | 58.0 | 4.01e-01 | 80.0% | 58.5% |
| 4946505 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.75 | 52.0 | 4.70e-01 | 74.0% | 57.1% |
| 4643894 | 9.1.1.8 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PA_decarbox | 0.75 | 65.0 | 4.59e-01 | 100.0% | 80.0% |
| 4583801 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.74 | 65.0 | 4.17e-01 | 100.0% | 29.4% |
| 5054384 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.74 | 59.0 | 5.34e-01 | 88.0% | 74.3% |
| 1724304 | 9.1.1.30 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_like | 0.74 | 64.0 | 5.04e-01 | 98.0% | 92.2% |
| 3856612 | 319.1.1.9 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DPCD | 0.73 | 61.0 | 4.09e-01 | 92.0% | 33.5% |
| 4364087 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.73 | 53.0 | 4.06e-01 | 78.0% | 35.7% |
| 4539150 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.73 | 60.0 | 4.44e-01 | 94.0% | 97.8% |
| 4330938 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.73 | 63.0 | 4.16e-01 | 98.0% | 47.8% |
| 4247114 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.73 | 65.0 | 4.26e-01 | 100.0% | 55.0% |
| 3407532 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.72 | 59.0 | 5.99e-01 | 92.0% | 98.0% |
| 3296838 | 4099.1.1.14 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C | 0.72 | 59.0 | 4.86e-01 | 94.0% | 72.6% |
| 3968900 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.72 | 58.0 | 4.50e-01 | 94.0% | 47.5% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 59.0 | 5.86e-01 | 100.0% | 88.9% |
| 2755883 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.71 | 58.0 | 4.80e-01 | 92.0% | 54.3% |
| 3738698 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.70 | 61.0 | 4.65e-01 | 100.0% | 70.0% |
| 3581438 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.70 | 59.0 | 3.59e-01 | 100.0% | 64.9% |
| 4946504 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 53.0 | 4.83e-01 | 84.0% | 62.9% |
| 4207610 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.70 | 60.0 | 4.30e-01 | 98.0% | 76.0% |
| 5049779 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.70 | 56.0 | 3.89e-01 | 92.0% | 43.4% |
| 3404508 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 59.0 | 3.55e-01 | 96.0% | 37.9% |
| 5003246 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.69 | 60.0 | 4.31e-01 | 100.0% | 38.0% |
| 5022918 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 56.0 | 4.21e-01 | 96.0% | 46.7% |
| 3290321 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 59.0 | 4.77e-01 | 100.0% | 96.0% |
| 5053933 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 51.0 | 4.69e-01 | 84.0% | 63.1% |
| 4256702 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.68 | 58.0 | 4.44e-01 | 100.0% | 75.8% |
| 5002505 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 49.0 | 4.63e-01 | 90.0% | 65.0% |
| 4029617 | 5.1.11.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 | 0.67 | 47.0 | 2.79e-01 | 78.0% | 8.5% |
| 3661053 | 5.1.5.132 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF7899 | 0.66 | 48.0 | 2.83e-01 | 80.0% | 9.0% |
| 3940690 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 45.0 | 3.51e-01 | 72.0% | 34.3% |
| 3977419 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.65 | 49.0 | 3.98e-01 | 84.0% | 43.0% |
| 4981443 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.64 | 54.0 | 3.26e-01 | 100.0% | 65.8% |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.62 | 53.0 | 4.82e-01 | 100.0% | 82.9% |
| 3716765 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.61 | 54.0 | 3.04e-01 | 100.0% | 35.2% |
| 4961453 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.61 | 52.0 | 3.14e-01 | 100.0% | 29.1% |
| 3369627 | 5.1.4.226 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7899 | 0.61 | 50.0 | 3.03e-01 | 100.0% | 27.2% |
| 4032017 | 2004.1.1.301 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 | 0.61 | 52.0 | 2.98e-01 | 100.0% | 16.9% |
| 3604573 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.60 | 51.0 | 2.89e-01 | 100.0% | 14.5% |
| 4929797 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.60 | 50.0 | 4.76e-01 | 96.0% | 79.7% |
| 3516548 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 44.0 | 3.17e-01 | 84.0% | 45.5% |
| 3993651 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 48.0 | 3.10e-01 | 100.0% | 49.6% |
| 4963562 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.53 | 43.0 | 2.72e-01 | 100.0% | 31.0% |
D2
medium
residues 75-147
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27224.1 best | YfjT | 33.6 | 6.50e-08 | 84.9% | 50.4% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.63 | 52.0 | 4.21e-01 | 91.8% | 55.9% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 49.0 | 3.63e-01 | 87.7% | 38.8% |
| 3dtyB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 35.0 | 2.54e-01 | 83.6% | 22.7% |
| 1u0tA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.60 | 43.0 | 3.52e-01 | 76.7% | 75.2% |
| 3v5nB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 34.0 | 2.54e-01 | 83.6% | 22.8% |
| 1rypD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.57 | 48.0 | 3.36e-01 | 93.2% | 83.8% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.57 | 48.0 | 4.53e-01 | 98.6% | 87.2% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 31.0 | 3.88e-01 | 97.3% | 97.4% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 41.0 | 3.62e-01 | 79.5% | 51.4% |
| 4upiA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.56 | 39.0 | 2.36e-01 | 71.2% | 73.9% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 40.0 | 3.60e-01 | 79.5% | 51.9% |
| 1k32A04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 44.0 | 4.10e-01 | 87.7% | 87.4% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.55 | 40.0 | 3.43e-01 | 76.7% | 53.7% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.55 | 28.0 | 3.08e-01 | 97.3% | 56.9% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 34.0 | 3.24e-01 | 100.0% | 51.7% |
| 1xhnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 48.0 | 3.71e-01 | 98.6% | 63.3% |
| 4chiA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.54 | 41.0 | 3.11e-01 | 80.8% | 64.2% |
| 4flnA02 | 3.20.190.20 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › | 0.54 | 47.0 | 3.74e-01 | 100.0% | 59.2% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 3.10e-01 | 82.2% | 44.6% |
| 3apqA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 37.0 | 3.22e-01 | 74.0% | 70.7% |
| 3jygA00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.52 | 37.0 | 2.83e-01 | 76.7% | 93.3% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 44.0 | 3.58e-01 | 100.0% | 58.4% |
| 4oijA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 29.0 | 3.02e-01 | 95.9% | 57.7% |
| 1yarH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 41.0 | 3.08e-01 | 93.2% | 94.6% |
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 36.0 | 2.53e-01 | 75.3% | 67.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3991902 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.68 | 49.0 | 4.30e-01 | 76.7% | 61.8% |
| 3817420 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 49.0 | 3.69e-01 | 79.5% | 40.0% |
| 5023066 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.64 | 54.0 | 4.68e-01 | 95.9% | 75.0% |
| 3262472 | 221.7.1.1 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › E2_bind | 0.64 | 46.0 | 4.35e-01 | 76.7% | 65.6% |
| 3709607 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 47.0 | 3.60e-01 | 79.5% | 40.6% |
| 7384 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.61 | 49.0 | 3.63e-01 | 87.7% | 38.8% |
| 4241417 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.61 | 49.0 | 3.47e-01 | 90.4% | 43.4% |
| 3579472 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 43.0 | 3.60e-01 | 79.5% | 43.1% |
| 3599017 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.60 | 42.0 | 3.34e-01 | 76.7% | 43.5% |
| 3933404 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 43.0 | 3.45e-01 | 78.1% | 41.3% |
| 3229643 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 40.0 | 3.41e-01 | 75.3% | 43.3% |
| 4325664 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.59 | 29.0 | 3.17e-01 | 84.9% | 55.0% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 42.0 | 3.71e-01 | 79.5% | 50.9% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 42.0 | 3.63e-01 | 79.5% | 47.8% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 42.0 | 3.64e-01 | 79.5% | 48.7% |
| 3470130 | 219.1.1.81 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD | 0.57 | 40.0 | 2.63e-01 | 72.6% | 26.3% |
| 4017372 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 42.0 | 3.59e-01 | 79.5% | 48.7% |
| 3409778 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 41.0 | 3.52e-01 | 79.5% | 56.2% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 41.0 | 3.65e-01 | 79.5% | 52.8% |
| 5000789 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 40.0 | 3.62e-01 | 78.1% | 53.3% |
| 3808127 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.56 | 51.0 | 4.10e-01 | 100.0% | 73.3% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.56 | 42.0 | 3.84e-01 | 82.2% | 94.0% |
| 3344258 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.56 | 39.0 | 3.48e-01 | 74.0% | 77.9% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.56 | 40.0 | 3.59e-01 | 79.5% | 51.8% |
| 5038351 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.56 | 33.0 | 2.39e-01 | 74.0% | 17.6% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 40.0 | 3.51e-01 | 78.1% | 52.2% |
| 4027679 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 42.0 | 3.68e-01 | 79.5% | 55.2% |
| 3539447 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.55 | 46.0 | 4.22e-01 | 91.8% | 80.0% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 38.0 | 3.30e-01 | 80.8% | 46.1% |
| 4086511 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.55 | 45.0 | 3.97e-01 | 91.8% | 69.1% |
| 3803377 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.54 | 47.0 | 3.90e-01 | 95.9% | 60.8% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 38.0 | 3.28e-01 | 79.5% | 45.8% |
| 3249313 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.54 | 47.0 | 3.77e-01 | 100.0% | 59.3% |
| 3771989 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 38.0 | 3.15e-01 | 80.8% | 40.7% |
| 3373766 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.53 | 47.0 | 3.76e-01 | 100.0% | 59.3% |
| 3789193 | 109.4.1.560 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7 | 0.53 | 46.0 | 2.69e-01 | 95.9% | 17.9% |
| 3645831 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.53 | 45.0 | 3.63e-01 | 100.0% | 56.1% |
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 37.0 | 3.09e-01 | 80.8% | 40.0% |
| 3536576 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.52 | 32.0 | 3.11e-01 | 98.6% | 55.3% |
| 428210 | 3243.1.1.1 ↗ | alpha complex topology › VopL dimerization domain › VopL dimerization domain › VopL dimerization domain › VCD | 0.52 | 42.0 | 2.98e-01 | 89.0% | 84.1% |
| 4463557 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 37.0 | 3.42e-01 | 76.7% | 65.3% |
| 3957352 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 42.0 | 3.84e-01 | 95.9% | 80.0% |
| 3785619 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 37.0 | 3.22e-01 | 79.5% | 50.4% |