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NC_048807.1__YP_009851568.1__HWC63_gp045__00045

Bact-Vir

NC_048807.1__YP_009851568.1__HWC63_gp045__00045

Identity

Accession:
NC_048807 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-55
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gnaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 55.0 3.63e-01 93.2% 35.6%
6t4hA03 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.64 54.0 3.68e-01 100.0% 68.0%
2wg7A00 1.20.90.10 Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain 0.63 54.0 3.98e-01 100.0% 36.4%
5z5mA01 1.10.3330.10 Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.61 54.0 3.74e-01 100.0% 29.5%
2cufA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 49.0 4.24e-01 100.0% 70.8%
1jb0K00 1.20.860.20 Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre 0.54 41.0 4.05e-01 90.9% 82.6%
1a3qA01 2.60.40.340 Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain 0.52 42.0 2.80e-01 88.6% 27.4%
3f6tA02 1.10.20.110 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.50 45.0 3.11e-01 100.0% 29.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4951822 2005.1.1.124 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DALR_1 0.64 54.0 3.05e-01 97.7% 7.9%
5048091 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.62 53.0 3.07e-01 100.0% 29.4%
3704684 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 51.0 3.94e-01 95.5% 69.5%