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NC_048807.1__YP_009851568.1__HWC63_gp045__00045
Bact-VirNC_048807.1__YP_009851568.1__HWC63_gp045__00045
Identity
- Accession:
- NC_048807 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Taxonomy
TaxID: 2601643
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-55
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gnaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 55.0 | 3.63e-01 | 93.2% | 35.6% |
| 6t4hA03 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.64 | 54.0 | 3.68e-01 | 100.0% | 68.0% |
| 2wg7A00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.63 | 54.0 | 3.98e-01 | 100.0% | 36.4% |
| 5z5mA01 | 1.10.3330.10 | Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 0.61 | 54.0 | 3.74e-01 | 100.0% | 29.5% |
| 2cufA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 49.0 | 4.24e-01 | 100.0% | 70.8% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.54 | 41.0 | 4.05e-01 | 90.9% | 82.6% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.52 | 42.0 | 2.80e-01 | 88.6% | 27.4% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.50 | 45.0 | 3.11e-01 | 100.0% | 29.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951822 | 2005.1.1.124 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DALR_1 | 0.64 | 54.0 | 3.05e-01 | 97.7% | 7.9% |
| 5048091 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.62 | 53.0 | 3.07e-01 | 100.0% | 29.4% |
| 3704684 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 51.0 | 3.94e-01 | 95.5% | 69.5% |