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NC_048808.1__YP_009851890.1__HWC64_gp071__00118

Bact-Vir

NC_048808.1__YP_009851890.1__HWC64_gp071__00118

Identity

Accession:
NC_048808 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-72
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.60 43.0 3.19e-01 78.7% 78.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943006 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.71 63.0 4.02e-01 100.0% 24.5%
4659175 284.1.1.3 a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase 0.68 48.0 3.96e-01 73.8% 84.8%
3590909 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.66 59.0 3.75e-01 95.1% 93.3%
3589399 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.58 51.0 3.32e-01 98.4% 36.1%
3972383 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 34.0 3.26e-01 78.7% 52.9%
3624059 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.51 38.0 3.33e-01 85.2% 59.0%