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NC_048821.1__YP_009853395.1__HWC77_gp043__00043

Bact-Vir

NC_048821.1__YP_009853395.1__HWC77_gp043__00043

Identity

Accession:
NC_048821 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 54-167
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.56 38.0 3.38e-01 81.6% 49.4%
6qwvH02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.55 25.0 3.23e-01 84.2% 77.6%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.53 22.0 2.84e-01 79.8% 62.7%
4hyqA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 42.0 3.32e-01 90.4% 67.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3382589 633.16.1.0 alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like 0.57 29.0 2.75e-01 85.1% 40.7%
4020112 4030.1.1.0 alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.56 34.0 4.11e-01 71.1% 93.3%
3676493 109.52.1.1 alpha superhelices › Repetitive alpha hairpins › FRIGIDA flowering-time regulator › FRIGIDA flowering-time regulator › Frigida 0.53 38.0 3.08e-01 75.4% 56.2%
4271344 101.1.1.305 alpha arrays › HTH › HTH › Three-helical HTH › ALS2CR8 0.52 28.0 3.30e-01 86.8% 80.0%