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NC_048821.1__YP_009853542.1__HWC77_gp190__00190
Bact-VirNC_048821.1__YP_009853542.1__HWC77_gp190__00190
Identity
- Accession:
- NC_048821 ↗
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Aphroditevirus›
Photobacterium_phage_PDCC-1
TaxID: 2664246
Cluster
View cluster (116 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-138
Domain cluster:
rep: Thymidylate_kinase__YP_009408098__Eptesipox_virus__1329402__D1-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02223.24 best | Thymidylate_kin | 58.6 | 9.30e-16 | 100.0% | 64.9% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 76.0 | 6.42e-01 | 100.0% | 60.4% |
| 1e9fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 75.0 | 6.31e-01 | 100.0% | 58.9% |
| 3lv8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 79.0 | 6.61e-01 | 100.0% | 61.8% |
| 3ld9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 77.0 | 6.65e-01 | 100.0% | 65.8% |
| 3v9pB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 77.0 | 6.46e-01 | 100.0% | 61.9% |
| 2plrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 72.0 | 5.90e-01 | 100.0% | 54.7% |
| 4mqbB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 75.0 | 6.28e-01 | 100.0% | 62.1% |
| 1gtvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 73.0 | 6.13e-01 | 100.0% | 63.0% |
| 5uivA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 74.0 | 5.96e-01 | 100.0% | 58.2% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 48.0 | 4.65e-01 | 79.4% | 80.3% |
| 3zpjA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 44.0 | 3.18e-01 | 72.2% | 25.8% |
| 1qgrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 45.0 | 2.75e-01 | 76.2% | 12.5% |
| 2xheA04 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 41.0 | 4.21e-01 | 73.0% | 70.3% |
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.60 | 22.0 | 2.76e-01 | 99.2% | 50.6% |
| 2ibdA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 45.0 | 4.30e-01 | 79.4% | 81.6% |
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.60 | 40.0 | 4.11e-01 | 76.2% | 72.0% |
| 1bxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 52.0 | 3.74e-01 | 97.6% | 62.5% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 45.0 | 4.25e-01 | 79.4% | 77.2% |
| 2yxoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 53.0 | 4.19e-01 | 99.2% | 86.8% |
| 1vb5A01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.59 | 39.0 | 4.34e-01 | 73.0% | 89.4% |
| 4c0hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 52.0 | 4.29e-01 | 100.0% | 74.9% |
| 1ya0A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 43.0 | 3.72e-01 | 81.0% | 91.7% |
| 2db0B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 41.0 | 3.31e-01 | 75.4% | 56.2% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 44.0 | 3.73e-01 | 83.3% | 92.8% |
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.56 | 42.0 | 4.28e-01 | 81.0% | 100.0% |
| 4g3aB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 41.0 | 3.35e-01 | 76.2% | 43.2% |
| 4bmoA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.56 | 48.0 | 3.74e-01 | 96.0% | 92.8% |
| 1zzwA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 45.0 | 4.31e-01 | 88.1% | 99.3% |
| 1y1pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 3.67e-01 | 100.0% | 69.4% |
| 1jflA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 4.75e-01 | 95.2% | 100.0% |
| 1k77A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.55 | 48.0 | 3.88e-01 | 100.0% | 90.7% |
| 3n0aA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 46.0 | 4.10e-01 | 93.7% | 91.7% |
| 3m1aJ00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 3.77e-01 | 100.0% | 75.7% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 48.0 | 3.98e-01 | 100.0% | 74.4% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.52 | 27.0 | 3.57e-01 | 78.6% | 98.4% |
| 1e6uA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 3.87e-01 | 100.0% | 94.5% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 46.0 | 3.82e-01 | 97.6% | 90.6% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062006 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.90 | 81.0 | 6.54e-01 | 100.0% | 54.1% |
| 4043560 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.88 | 81.0 | 6.79e-01 | 100.0% | 61.1% |
| 5043901 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.88 | 79.0 | 6.56e-01 | 100.0% | 58.5% |
| 5036326 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.88 | 78.0 | 6.53e-01 | 100.0% | 58.5% |
| 4524118 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.88 | 82.0 | 6.73e-01 | 100.0% | 58.6% |
| 4105792 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.88 | 80.0 | 6.56e-01 | 100.0% | 57.1% |
| 5048439 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 80.0 | 6.54e-01 | 100.0% | 56.7% |
| 4518593 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 79.0 | 6.52e-01 | 100.0% | 58.5% |
| 4939074 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 76.0 | 6.27e-01 | 100.0% | 55.2% |
| 4957829 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 77.0 | 6.47e-01 | 100.0% | 59.0% |
| 4969776 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 79.0 | 6.56e-01 | 100.0% | 59.0% |
| 4678908 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 77.0 | 6.16e-01 | 100.0% | 52.0% |
| 4516640 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.87 | 79.0 | 6.63e-01 | 100.0% | 60.8% |
| 4680943 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 78.0 | 6.52e-01 | 100.0% | 59.5% |
| 4470699 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 77.0 | 6.42e-01 | 100.0% | 58.1% |
| 4240907 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 77.0 | 6.50e-01 | 100.0% | 60.5% |
| 4451151 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 82.0 | 6.68e-01 | 100.0% | 59.1% |
| 4943200 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 78.0 | 6.43e-01 | 100.0% | 57.1% |
| None | — | 0.86 | 78.0 | 6.48e-01 | 100.0% | 58.8% | |
| 4119253 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 82.0 | 6.55e-01 | 100.0% | 62.7% |
| 4935158 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.86 | 76.0 | 5.91e-01 | 100.0% | 47.8% |
| 3503558 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 81.0 | 6.51e-01 | 100.0% | 56.8% |
| 4974163 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 77.0 | 6.27e-01 | 100.0% | 55.6% |
| 3798633 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 78.0 | 6.38e-01 | 100.0% | 56.8% |
| 4016587 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 78.0 | 6.09e-01 | 100.0% | 49.4% |
| 4402621 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 74.0 | 6.30e-01 | 100.0% | 59.3% |
| 4213018 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 79.0 | 6.50e-01 | 100.0% | 58.6% |
| 4307343 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 80.0 | 6.60e-01 | 100.0% | 59.5% |
| 4928969 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 76.0 | 6.37e-01 | 100.0% | 59.3% |
| 4497050 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 79.0 | 6.39e-01 | 100.0% | 55.9% |
| 5033182 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 78.0 | 6.59e-01 | 100.0% | 62.4% |
| 4569464 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 76.0 | 6.41e-01 | 100.0% | 60.5% |
| 4940702 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 76.0 | 6.33e-01 | 100.0% | 59.0% |
| 4193197 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 81.0 | 6.37e-01 | 100.0% | 57.0% |
| 389395 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 76.0 | 6.24e-01 | 100.0% | 56.1% |
| 4636169 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.85 | 80.0 | 6.60e-01 | 100.0% | 60.0% |
| 5057758 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 76.0 | 6.39e-01 | 100.0% | 60.0% |
| 4263586 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 80.0 | 6.64e-01 | 100.0% | 61.5% |
| 5054127 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 75.0 | 6.36e-01 | 100.0% | 60.5% |
| 4948439 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 76.0 | 6.39e-01 | 100.0% | 60.0% |
| 4480559 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 78.0 | 6.34e-01 | 100.0% | 56.2% |
| 5009778 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 74.0 | 6.10e-01 | 100.0% | 55.2% |
| 4935132 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 74.0 | 5.94e-01 | 100.0% | 50.9% |
| 4659428 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 80.0 | 6.35e-01 | 100.0% | 54.8% |
| 169245 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 74.0 | 6.14e-01 | 100.0% | 56.9% |
| 4133212 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 78.0 | 6.34e-01 | 100.0% | 56.4% |
| 4313877 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 78.0 | 6.23e-01 | 100.0% | 53.9% |
| 5009777 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 73.0 | 6.13e-01 | 100.0% | 57.1% |
| 4967102 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.84 | 80.0 | 6.28e-01 | 100.0% | 54.0% |
| 384339 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.83 | 77.0 | 6.72e-01 | 100.0% | 68.0% |
| 4457642 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.83 | 78.0 | 6.41e-01 | 100.0% | 60.7% |
| 4933472 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.83 | 78.0 | 6.27e-01 | 100.0% | 59.1% |
| None | — | 0.83 | 77.0 | 6.22e-01 | 100.0% | 56.4% | |
| 4936538 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 78.0 | 6.19e-01 | 100.0% | 63.4% |
| 5040462 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 78.0 | 6.43e-01 | 100.0% | 60.5% |
| 4279626 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 76.0 | 6.31e-01 | 100.0% | 60.0% |
| 4435793 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 77.0 | 6.30e-01 | 100.0% | 58.1% |
| 3469908 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 75.0 | 6.06e-01 | 100.0% | 54.2% |
| 4588927 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 77.0 | 6.24e-01 | 100.0% | 56.4% |
| 4976930 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.82 | 77.0 | 6.32e-01 | 100.0% | 58.7% |
| 4314340 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.81 | 71.0 | 5.96e-01 | 100.0% | 57.6% |
| 5037208 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.81 | 75.0 | 6.14e-01 | 100.0% | 60.0% |
| 5077283 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.81 | 76.0 | 6.22e-01 | 100.0% | 59.1% |
| 5078089 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.80 | 72.0 | 5.94e-01 | 100.0% | 56.3% |
| 4670441 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.80 | 71.0 | 5.92e-01 | 100.0% | 57.6% |
| 4090703 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.80 | 75.0 | 6.21e-01 | 100.0% | 60.5% |
| 5006758 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.79 | 65.0 | 5.63e-01 | 100.0% | 57.5% |
| 4952303 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.77 | 66.0 | 5.76e-01 | 100.0% | 62.2% |
| 5077286 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.71 | 67.0 | 5.45e-01 | 100.0% | 61.4% |
| 3626562 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 43.0 | 3.55e-01 | 72.2% | 37.3% |
| 3929749 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 43.0 | 3.85e-01 | 72.2% | 46.9% |
| 3611920 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 41.0 | 3.74e-01 | 78.6% | 92.1% |
| 3598920 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.53 | 47.0 | 3.88e-01 | 97.6% | 92.4% |
| 4320114 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.52 | 46.0 | 3.79e-01 | 97.6% | 96.1% |
| 3742561 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.52 | 47.0 | 3.87e-01 | 96.8% | 92.1% |
| 4309014 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.52 | 46.0 | 4.17e-01 | 97.6% | 75.3% |
| 3888499 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.51 | 46.0 | 3.79e-01 | 96.8% | 87.1% |
| 3690229 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.51 | 47.0 | 3.90e-01 | 99.2% | 93.5% |
| 3498425 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.74e-01 | 77.8% | 47.6% |
| 3180807 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.51 | 35.0 | 3.97e-01 | 73.0% | 98.9% |
D2
medium
residues 139-202
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gwgA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 48.0 | 3.03e-01 | 75.0% | 75.0% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 38.0 | 3.69e-01 | 75.0% | 56.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051879 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 40.0 | 3.79e-01 | 75.0% | 50.7% |
| 3894905 | 5054.1.1.63 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C | 0.63 | 47.0 | 2.96e-01 | 78.1% | 31.6% |
| 3665770 | 1026.1.1.4 ↗ | alpha bundles › Rev protein › Rev protein › Rev protein › Nup84_Nup100 | 0.55 | 39.0 | 3.10e-01 | 73.4% | 40.8% |